STRINGSTRING
galE_3 galE_3 gtaB_1 gtaB_1 algA_1 algA_1 algA_2 algA_2 tuaD_2 tuaD_2 algC algC BVIR_330 BVIR_330 rffG rffG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
galE_3UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (329 aa)
gtaB_1UTP--glucose-1-phosphate uridylyltransferase. (291 aa)
algA_1Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. (474 aa)
algA_2Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. (469 aa)
tuaD_2UDP-glucose 6-dehydrogenase TuaD. (434 aa)
algCPhosphomannomutase/phosphoglucomutase. (498 aa)
BVIR_330Glycosyl transferase family 2. (286 aa)
rffGdTDP-glucose 4,6-dehydratase 2. (338 aa)
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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