(15 nodes) Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity network (Blastochloris viridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Others

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protein homology

Your Input:
	peb1A_1	General L-amino acid-binding periplasmic protein AapJ precursor; Belongs to the bacterial solute-binding protein 3 family. (342 aa)
	yecS	Inner membrane amino-acid ABC transporter permease protein YecS. (409 aa)
	yhdY	Inner membrane amino-acid ABC transporter permease protein YhdY. (377 aa)
	artM_1	Glutamine transport ATP-binding protein GlnQ. (253 aa)
	tcyC_1	Glutamine transport ATP-binding protein GlnQ. (630 aa)
	fliY_2	ABC transporter glutamine-binding protein GlnH precursor; Belongs to the bacterial solute-binding protein 3 family. (270 aa)
	artM_2	Glutamine transport ATP-binding protein GlnQ. (273 aa)
	artQ_1	Putative glutamine ABC transporter permease protein GlnP. (260 aa)
	gltK_1	Putative glutamine ABC transporter permease protein GlnP. (250 aa)
	peb1A_2	General L-amino acid-binding periplasmic protein AapJ precursor; Belongs to the bacterial solute-binding protein 3 family. (346 aa)
	gltI	Glutamate/aspartate periplasmic-binding protein precursor. (301 aa)
	glnP	Putative glutamine ABC transporter permease protein GlnM. (245 aa)
	gltK_2	Glutamate/aspartate transport system permease protein GltK. (230 aa)
	artM_3	Glutamine transport ATP-binding protein GlnQ. (245 aa)
	artI	Putative ABC transporter arginine-binding protein 2 precursor. (284 aa)

Your Current Organism:

Blastochloris viridis

NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
artI	artM_1	BVIR_3236	BVIR_1531	Putative ABC transporter arginine-binding protein 2 precursor.	Glutamine transport ATP-binding protein GlnQ.	0.799
artI	artM_2	BVIR_3236	BVIR_2023	Putative ABC transporter arginine-binding protein 2 precursor.	Glutamine transport ATP-binding protein GlnQ.	0.810
artI	artM_3	BVIR_3236	BVIR_249	Putative ABC transporter arginine-binding protein 2 precursor.	Glutamine transport ATP-binding protein GlnQ.	0.826
artI	artQ_1	BVIR_3236	BVIR_2024	Putative ABC transporter arginine-binding protein 2 precursor.	Putative glutamine ABC transporter permease protein GlnP.	0.833
artI	glnP	BVIR_3236	BVIR_247	Putative ABC transporter arginine-binding protein 2 precursor.	Putative glutamine ABC transporter permease protein GlnM.	0.827
artI	gltI	BVIR_3236	BVIR_246	Putative ABC transporter arginine-binding protein 2 precursor.	Glutamate/aspartate periplasmic-binding protein precursor.	0.646
artI	gltK_1	BVIR_3236	BVIR_2025	Putative ABC transporter arginine-binding protein 2 precursor.	Putative glutamine ABC transporter permease protein GlnP.	0.831
artI	gltK_2	BVIR_3236	BVIR_248	Putative ABC transporter arginine-binding protein 2 precursor.	Glutamate/aspartate transport system permease protein GltK.	0.834
artI	tcyC_1	BVIR_3236	BVIR_2020	Putative ABC transporter arginine-binding protein 2 precursor.	Glutamine transport ATP-binding protein GlnQ.	0.881
artI	yecS	BVIR_3236	BVIR_1529	Putative ABC transporter arginine-binding protein 2 precursor.	Inner membrane amino-acid ABC transporter permease protein YecS.	0.512
artI	yhdY	BVIR_3236	BVIR_1530	Putative ABC transporter arginine-binding protein 2 precursor.	Inner membrane amino-acid ABC transporter permease protein YhdY.	0.733
artM_1	artI	BVIR_1531	BVIR_3236	Glutamine transport ATP-binding protein GlnQ.	Putative ABC transporter arginine-binding protein 2 precursor.	0.799
artM_1	artQ_1	BVIR_1531	BVIR_2024	Glutamine transport ATP-binding protein GlnQ.	Putative glutamine ABC transporter permease protein GlnP.	0.910
artM_1	fliY_2	BVIR_1531	BVIR_2022	Glutamine transport ATP-binding protein GlnQ.	ABC transporter glutamine-binding protein GlnH precursor; Belongs to the bacterial solute-binding protein 3 family.	0.855
artM_1	glnP	BVIR_1531	BVIR_247	Glutamine transport ATP-binding protein GlnQ.	Putative glutamine ABC transporter permease protein GlnM.	0.908
artM_1	gltI	BVIR_1531	BVIR_246	Glutamine transport ATP-binding protein GlnQ.	Glutamate/aspartate periplasmic-binding protein precursor.	0.648
artM_1	gltK_1	BVIR_1531	BVIR_2025	Glutamine transport ATP-binding protein GlnQ.	Putative glutamine ABC transporter permease protein GlnP.	0.909
artM_1	gltK_2	BVIR_1531	BVIR_248	Glutamine transport ATP-binding protein GlnQ.	Glutamate/aspartate transport system permease protein GltK.	0.950
artM_1	peb1A_1	BVIR_1531	BVIR_1528	Glutamine transport ATP-binding protein GlnQ.	General L-amino acid-binding periplasmic protein AapJ precursor; Belongs to the bacterial solute-binding protein 3 family.	0.989
artM_1	peb1A_2	BVIR_1531	BVIR_2168	Glutamine transport ATP-binding protein GlnQ.	General L-amino acid-binding periplasmic protein AapJ precursor; Belongs to the bacterial solute-binding protein 3 family.	0.961

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