STRINGSTRING
LSM4 LSM4 ISF_09375 ISF_09375 ISF_09309 ISF_09309 ISF_08186 ISF_08186 ISF_05271 ISF_05271 TIF35 TIF35 ISF_03142 ISF_03142 ISF_00783 ISF_00783 ISF_00883 ISF_00883 ISF_01013 ISF_01013 ISF_09411 ISF_09411 ISF_08719 ISF_08719 ISF_01069 ISF_01069 ISF_09342 ISF_09342 ISF_02085 ISF_02085 ISF_01055 ISF_01055 ISF_01095 ISF_01095 ISF_04719 ISF_04719 ISF_04480 ISF_04480 ISF_03029 ISF_03029 ISF_01690 ISF_01690 ISF_02130 ISF_02130 ISF_01060 ISF_01060 ISF_09719 ISF_09719 ISF_09683 ISF_09683 ISF_09082 ISF_09082 ISF_09031 ISF_09031 ISF_08935 ISF_08935 ISF_08446 ISF_08446 ISF_08356 ISF_08356 ISF_08367 ISF_08367 ISF_08258 ISF_08258 ISF_08310 ISF_08310 ISF_08174 ISF_08174 ISF_08195 ISF_08195 ISF_08007 ISF_08007 ISF_08010 ISF_08010 ISF_08032 ISF_08032 ISF_07897 ISF_07897 ISF_07898 ISF_07898 ISF_07928 ISF_07928 ISF_07958 ISF_07958 ISF_07988 ISF_07988 ISF_07806 ISF_07806 ISF_07650 ISF_07650 ISF_07720 ISF_07720 ISF_07468 ISF_07468 ISF_07354 ISF_07354 ISF_07163 ISF_07163 ISF_07195 ISF_07195 ISF_06938 ISF_06938 ISF_07050 ISF_07050 ISF_06743 ISF_06743 ISF_06768 ISF_06768 ISF_06834 ISF_06834 ISF_06586 ISF_06586 ISF_06419 ISF_06419 ISF_05929 ISF_05929 ISF_05953 ISF_05953 ISF_06134 ISF_06134 ISF_06168 ISF_06168 ISF_05693 ISF_05693 ISF_05760 ISF_05760 ISF_05846 ISF_05846 ISF_05858 ISF_05858 PRT1 PRT1 ISF_05525 ISF_05525 ISF_05134 ISF_05134 ISF_05222 ISF_05222 ISF_05289 ISF_05289 ISF_04835 ISF_04835 ISF_04914 ISF_04914 RPS0 RPS0 ISF_04590 ISF_04590 ISF_04633 ISF_04633 ISF_04686 ISF_04686 ISF_04687 ISF_04687 ISF_04725 ISF_04725 HCR1 HCR1 ISF_04777 ISF_04777 ISF_04204 ISF_04204 ISF_04256 ISF_04256 ISF_04286 ISF_04286 ISF_04305 ISF_04305 ISF_04349 ISF_04349 ISF_04419 ISF_04419 ISF_04474 ISF_04474 ISF_04481 ISF_04481 ISF_04096 ISF_04096 ISF_03610 ISF_03610 ISF_03741 ISF_03741 ISF_03784 ISF_03784 ISF_03785 ISF_03785 ISF_03482 ISF_03482 ISF_02711 ISF_02711 ISF_02771 ISF_02771 ISF_02811 ISF_02811 ISF_03027 ISF_03027 ISF_03033 ISF_03033 NIP1 NIP1 ISF_03037 ISF_03037 ISF_02350 ISF_02350 ISF_02352 ISF_02352 ISF_02499 ISF_02499 ISF_02539 ISF_02539 ISF_01742 ISF_01742 ISF_01899 ISF_01899 TIF34 TIF34 ISF_01470 ISF_01470 ISF_01558 ISF_01558 ISF_01594 ISF_01594 ISF_00031 ISF_00031 ISF_00054 ISF_00054 ISF_00281 ISF_00281 ISF_00342 ISF_00342 ISF_00422 ISF_00422 INT6 INT6 ISF_00628 ISF_00628 ISF_00702 ISF_00702 TIF32 TIF32 ISF_00864 ISF_00864 ISF_00887 ISF_00887 ISF_00971 ISF_00971 ISF_00986 ISF_00986 ISF_01038 ISF_01038
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (169 aa)
ISF_09375Nucleic acid-binding, OB-fold protein. (457 aa)
ISF_09309Protein kinase-like domain protein. (406 aa)
ISF_08186TPR domain protein. (530 aa)
ISF_05271U5 small nuclear ribonucleoprotein component. (981 aa)
TIF35Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (299 aa)
ISF_03142Mitochondrial ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (91 aa)
ISF_00783SMN family protein Smn1. (146 aa)
ISF_00883Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (434 aa)
ISF_01013Cleavage and polyadenylation specific factor 5. (265 aa)
ISF_09411Nucleotide-binding, alpha-beta plait. (855 aa)
ISF_08719Brix domain protein. (440 aa)
ISF_01069Uncharacterized protein. (247 aa)
ISF_0934260S ribosomal protein L5 (CPR4). (302 aa)
ISF_02085Nucleic acid-binding, OB-fold-like protein. (1776 aa)
ISF_0105540S ribosomal protein S19 (S16). (174 aa)
ISF_01095Translation initiation factor eIF4B. (527 aa)
ISF_04719Protein kinase-like domain protein. (425 aa)
ISF_04480Uncharacterized protein. (385 aa)
ISF_03029Procn. (2526 aa)
ISF_01690Isoflavone reductase family protein. (310 aa)
ISF_02130mRNA splicing protein Yju2. (286 aa)
ISF_01060Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (95 aa)
ISF_09719Uncharacterized protein. (205 aa)
ISF_0968360S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
ISF_09082Nucleotide-binding, alpha-beta plait. (1058 aa)
ISF_09031Protein kinase-like domain protein. (237 aa)
ISF_08935NAD(P)-binding domain protein. (343 aa)
ISF_08446Uncharacterized protein. (186 aa)
ISF_08356SAGA complex component. (396 aa)
ISF_0836760S ribosomal protein L23. (162 aa)
ISF_08258Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (205 aa)
ISF_0831037S ribosomal protein S11. (174 aa)
ISF_08174RNA binding domain protein. (303 aa)
ISF_08195Ribosomal protein S27e. (82 aa)
ISF_08007Protein kinase domain-containing protein. (125 aa)
ISF_08010Protein kinase-like domain protein. (562 aa)
ISF_08032WD40 repeat-like-containing domain protein. (347 aa)
ISF_07897Small nuclear ribonucleoprotein SmF. (86 aa)
ISF_07898GTP-binding protein EsdC. (322 aa)
ISF_07928U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (197 aa)
ISF_07958Periodic tryptophan protein 2. (902 aa)
ISF_07988Eukaryotic translation initiation factor 2 beta subunit. (341 aa)
ISF_07806Ribosomal protein S28e. (68 aa)
ISF_07650Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (232 aa)
ISF_07720Multisynthetase complex auxiliary component p43. (405 aa)
ISF_07468Ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family. (75 aa)
ISF_07354ATP-dependent RNA helicase DHX8. (1012 aa)
ISF_07163AAR2 family protein. (434 aa)
ISF_07195Uncharacterized protein. (176 aa)
ISF_06938Plus-3 like protein. (609 aa)
ISF_07050Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (439 aa)
ISF_06743Zinc finger, HIT-type. (441 aa)
ISF_06768Protein kinase-like domain protein. (176 aa)
ISF_06834Splicing factor PWI. (662 aa)
ISF_06586Translation initiation factor IF2/IF5. (414 aa)
ISF_06419Ribosomal protein S7. (360 aa)
ISF_05929WD repeat protein. (514 aa)
ISF_05953Protein kinase-like domain protein. (348 aa)
ISF_06134Protein kinase-like domain protein. (346 aa)
ISF_06168Eukaryotic translation initiation factor eIF-1A; Belongs to the eIF-1A family. (156 aa)
ISF_05693WD40 repeat-like-containing domain protein. (433 aa)
ISF_05760Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (378 aa)
ISF_05846Serine protein kinase Sky1. (195 aa)
ISF_05858H/ACA ribonucleoprotein complex, subunit Gar1/Naf1. (588 aa)
PRT1Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (749 aa)
ISF_05525Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (654 aa)
ISF_05134Small nuclear ribonucleoprotein G. (83 aa)
ISF_05222Protein kinase-like domain protein. (187 aa)
ISF_05289Uncharacterized protein. (379 aa)
ISF_04835Pre-mRNA splicing factor. (877 aa)
ISF_0491440S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (209 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (292 aa)
ISF_04590Pre-mRNA splicing factor ISY1. (247 aa)
ISF_04633Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (513 aa)
ISF_04686Pre-mRNA splicing factor. (583 aa)
ISF_04687Tetratricopeptide-like helical. (674 aa)
ISF_04725Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (472 aa)
HCR1Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (271 aa)
ISF_04777Uncharacterized protein. (371 aa)
ISF_0420460S ribosomal protein L10-A-like protein. (219 aa)
ISF_04256Pre-mRNA splicing helicase. (2200 aa)
ISF_04286Splicing factor 3a subunit 2. (250 aa)
ISF_04305Brix domain protein. (307 aa)
ISF_04349HRDC-like protein. (157 aa)
ISF_04419mRNA splicing protein (Prp39). (587 aa)
ISF_04474Splicing factor 3b. (595 aa)
ISF_04481Brix domain-containing protein 2. (313 aa)
ISF_04096Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (419 aa)
ISF_03610PHF5-like protein. (110 aa)
ISF_03741Ribosomal protein S15, eukaryotic/archaeal; Belongs to the universal ribosomal protein uS19 family. (153 aa)
ISF_03784Splicing factor u2af large subunit. (820 aa)
ISF_03785U2 snRNP component prp10. (1205 aa)
ISF_03482U1 snRNP splicing complex subunit. (281 aa)
ISF_02711Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4633 aa)
ISF_02771Uncharacterized protein. (313 aa)
ISF_02811Topisomerase II associated protein. (835 aa)
ISF_03027Potassium channel regulatory factor. (350 aa)
ISF_03033Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (150 aa)
NIP1Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (863 aa)
ISF_03037Glutathione S-transferase. (282 aa)
ISF_02350DUF866 domain protein. (160 aa)
ISF_02352Uncharacterized protein. (156 aa)
ISF_02499Uncharacterized protein. (675 aa)
ISF_02539Tudor domain protein. (279 aa)
ISF_01742KH domain protein. (513 aa)
ISF_01899Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (360 aa)
TIF34Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (337 aa)
ISF_01470DUF202 domain-containing protein. (137 aa)
ISF_01558Ribosome biogenesis GTPase Lsg1. (668 aa)
ISF_01594Pre-mRNA splicing factor cwc2. (405 aa)
ISF_00031Eukaryotic translation initiation factor 2 gamma subunit. (508 aa)
ISF_00054Pre-mRNA splicing factor ATP-dependent RNA helicase prp16. (978 aa)
ISF_00281Uncharacterized protein. (414 aa)
ISF_00342mRNA splicing factor (Prp17). (522 aa)
ISF_0042260S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (200 aa)
INT6Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (446 aa)
ISF_00628Thioredoxin-like protein. (243 aa)
ISF_00702Protein kinase domain protein. (171 aa)
TIF32Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1059 aa)
ISF_00864Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (237 aa)
ISF_00887Protein kinase domain-containing protein. (171 aa)
ISF_00971U4/U6.U5 tri-snRNP-associated protein 2. (558 aa)
ISF_00986Small nuclear ribonucleoprotein Sm D2. (107 aa)
ISF_0103860S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
Your Current Organism:
Cordyceps fumosorosea
NCBI taxonomy Id: 1081104
Other names: C. fumosorosea ARSEF 2679, Cordyceps fumosorosea ARSEF 2679, Isaria fumosorosea ARSEF 2679
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