46 items (Cordyceps fumosorosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ISF_01558	Ribosome biogenesis GTPase Lsg1. (668 aa)
	ISF_01001	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	ISF_00416	60S ribosomal protein L35. (148 aa)
	ISF_00954	60S ribosomal protein L37. (119 aa)
	ISF_00422	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (200 aa)
	ISF_04050	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	ISF_03906	Uncharacterized protein. (338 aa)
	ISF_09342	60S ribosomal protein L5 (CPR4). (302 aa)
	ISF_00615	60S ribosomal protein L27a (L29); Belongs to the universal ribosomal protein uL15 family. (149 aa)
	ISF_09683	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
	ISF_09482	Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	ISF_09085	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (193 aa)
	ISF_09092	Ribosomal protein L18e. (184 aa)
	ISF_08479	60S ribosomal protein L26. (136 aa)
	ISF_08451	60S ribosomal protein L4. (352 aa)
	ISF_08339	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (65 aa)
	ISF_08367	60S ribosomal protein L23. (162 aa)
	ISF_07675	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (178 aa)
	ISF_07468	Ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family. (75 aa)
	ISF_07329	Uncharacterized protein. (350 aa)
	ISF_07128	Ribosomal protein L34-like protein. (115 aa)
	ISF_07161	60S ribosomal protein L32. (131 aa)
	ISF_06775	60S ribosomal protein L22. (151 aa)
	ISF_06566	Uncharacterized protein. (288 aa)
	ISF_06189	Uncharacterized protein. (293 aa)
	ISF_06284	60S ribosomal protein L28. (156 aa)
	ISF_01004	Ribosomal protein L39e. (77 aa)
	ISF_06144	Ribosomal protein L21e. (160 aa)
	ISF_05666	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (209 aa)
	ISF_05179	Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family. (139 aa)
	ISF_04890	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	ISF_04900	Complex I intermediate-associated protein 84. (798 aa)
	ISF_04648	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (98 aa)
	ISF_04667	Ribosomal protein L35A. (109 aa)
	ISF_04203	Ribosomal protein L30. (110 aa)
	ISF_04204	60S ribosomal protein L10-A-like protein. (219 aa)
	ISF_04326	60S ribosomal protein L9. (192 aa)
	ISF_03905	Uncharacterized protein. (479 aa)
	ISF_03627	Ribosomal protein L37ae. (92 aa)
	ISF_02867	60S ribosomal protein L31. (122 aa)
	ISF_02615	Uncharacterized protein. (598 aa)
	ISF_02645	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (213 aa)
	ISF_01867	Ribosomal protein 60S; Belongs to the eukaryotic ribosomal protein P1/P2 family. (111 aa)
	ISF_01171	Ribosomal protein L14. (147 aa)
	ISF_01286	Ribosomal protein L24e. (160 aa)
	ISF_01350	60S ribosomal protein L2. (254 aa)

Your Current Organism:

Cordyceps fumosorosea

NCBI taxonomy Id: 1081104
Other names: C. fumosorosea ARSEF 2679, Cordyceps fumosorosea ARSEF 2679, Isaria fumosorosea ARSEF 2679

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ISF_00416	ISF_00422	A0A168E8V8	A0A168E921	60S ribosomal protein L35.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.999
ISF_00416	ISF_00615	A0A168E8V8	A0A162LPE8	60S ribosomal protein L35.	60S ribosomal protein L27a (L29); Belongs to the universal ribosomal protein uL15 family.	0.999
ISF_00416	ISF_00954	A0A168E8V8	A0A168EP39	60S ribosomal protein L35.	60S ribosomal protein L37.	0.999
ISF_00416	ISF_01001	A0A168E8V8	A0A168EQG6	60S ribosomal protein L35.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.999
ISF_00416	ISF_01004	A0A168E8V8	A0A168EQM2	60S ribosomal protein L35.	Ribosomal protein L39e.	0.999
ISF_00416	ISF_01171	A0A168E8V8	A0A168D2S7	60S ribosomal protein L35.	Ribosomal protein L14.	0.999
ISF_00416	ISF_01286	A0A168E8V8	A0A168D608	60S ribosomal protein L35.	Ribosomal protein L24e.	0.999
ISF_00416	ISF_01350	A0A168E8V8	A0A168D870	60S ribosomal protein L35.	60S ribosomal protein L2.	0.999
ISF_00416	ISF_01558	A0A168E8V8	A0A168DDS5	60S ribosomal protein L35.	Ribosome biogenesis GTPase Lsg1.	0.909
ISF_00416	ISF_01867	A0A168E8V8	A0A168CFM8	60S ribosomal protein L35.	Ribosomal protein 60S; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.998
ISF_00416	ISF_02615	A0A168E8V8	A0A168BWM8	60S ribosomal protein L35.	Uncharacterized protein.	0.971
ISF_00416	ISF_02645	A0A168E8V8	A0A168BXE8	60S ribosomal protein L35.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
ISF_00416	ISF_02867	A0A168E8V8	A0A168B4B0	60S ribosomal protein L35.	60S ribosomal protein L31.	0.999
ISF_00416	ISF_03627	A0A168E8V8	A0A167ZFF5	60S ribosomal protein L35.	Ribosomal protein L37ae.	0.998
ISF_00416	ISF_03905	A0A168E8V8	A0A167YAI7	60S ribosomal protein L35.	Uncharacterized protein.	0.985
ISF_00416	ISF_03906	A0A168E8V8	A0A162KCJ0	60S ribosomal protein L35.	Uncharacterized protein.	0.989
ISF_00416	ISF_04050	A0A168E8V8	A0A162JAS5	60S ribosomal protein L35.	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.999
ISF_00416	ISF_04203	A0A168E8V8	A0A167XC87	60S ribosomal protein L35.	Ribosomal protein L30.	0.999
ISF_00416	ISF_04204	A0A168E8V8	A0A167XC96	60S ribosomal protein L35.	60S ribosomal protein L10-A-like protein.	0.999
ISF_00416	ISF_04326	A0A168E8V8	A0A167XFF8	60S ribosomal protein L35.	60S ribosomal protein L9.	0.999