STRINGSTRING
KKY_1012 KKY_1012 KKY_1099 KKY_1099 rpoZ rpoZ KKY_1230 KKY_1230 KKY_1251 KKY_1251 KKY_1280 KKY_1280 KKY_1281 KKY_1281 KKY_1330 KKY_1330 KKY_1335 KKY_1335 KKY_1481 KKY_1481 rpoA rpoA rpoC rpoC rpoB rpoB rplA rplA rplK rplK KKY_1806 KKY_1806 KKY_1829 KKY_1829 KKY_2051 KKY_2051 KKY_2053 KKY_2053 rpoD rpoD dnaG dnaG KKY_2183 KKY_2183 KKY_2250 KKY_2250 KKY_2311 KKY_2311 KKY_2331 KKY_2331 KKY_2387 KKY_2387 KKY_2396 KKY_2396 rpoH rpoH KKY_2479 KKY_2479 KKY_2533 KKY_2533 KKY_2534 KKY_2534 KKY_2707 KKY_2707 KKY_2726 KKY_2726 KKY_2842 KKY_2842 KKY_2851 KKY_2851 KKY_2855 KKY_2855 KKY_2856 KKY_2856 KKY_2973 KKY_2973 KKY_3012 KKY_3012 dnaE2 dnaE2 KKY_3262 KKY_3262 KKY_3278 KKY_3278 KKY_3432 KKY_3432 KKY_3623 KKY_3623 KKY_3889 KKY_3889 KKY_483 KKY_483 KKY_66 KKY_66 KKY_67 KKY_67 KKY_802 KKY_802 nadE nadE KKY_946 KKY_946
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KKY_1012Hypothetical protein. (63 aa)
KKY_1099Hypothetical protein. (188 aa)
rpoZDNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (122 aa)
KKY_1230Metal-dependent hydrolase. (257 aa)
KKY_1251Dipeptide transport system permease protein DppC; 3.A.1.5.2. (289 aa)
KKY_1280RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
KKY_1281Hypothetical protein. (235 aa)
KKY_1330Metallo-beta-lactamase family protein, RNA-specific. (570 aa)
KKY_1335DNA polymerase III alpha subunit. (1147 aa)
KKY_1481Deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily. (390 aa)
rpoADNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (338 aa)
rpoCDNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1400 aa)
rpoBDNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1380 aa)
rplALSU ribosomal protein L1p (L10Ae); Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (230 aa)
rplKLSU ribosomal protein L11p (L12e); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa)
KKY_1806DNA repair protein RadC; Belongs to the UPF0758 family. (227 aa)
KKY_1829Inositol monophosphatase and related sulfite synthesis enzyme. (270 aa)
KKY_2051DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein. (265 aa)
KKY_2053RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
rpoDRNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (690 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (640 aa)
KKY_2183RNA polymerase sigma-70 factor, ECF subfamily. (398 aa)
KKY_2250RNA polymerase sigma-70 factor, ECF subfamily. (177 aa)
KKY_2311Hypothetical protein. (138 aa)
KKY_2331Nitrate ABC transporter, nitrate-binding protein. (410 aa)
KKY_2387Cyanate ABC transporter, substrate binding protein. (421 aa)
KKY_2396Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (175 aa)
rpoHRNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. (292 aa)
KKY_2479Inositol-1-monophosphatase. (263 aa)
KKY_2533Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (191 aa)
KKY_2534Hypothetical protein. (219 aa)
KKY_2707Inositol monophosphatase family protein. (273 aa)
KKY_2726Conserved hypothetical protein. (118 aa)
KKY_2842Conserved hypothetical protein. (345 aa)
KKY_2851Antirestriction protein. (319 aa)
KKY_2855Hypothetical protein. (195 aa)
KKY_2856Putative N-acyl homoserine lactone transcriptional regulator, LuxR-like protein. (155 aa)
KKY_2973LuxR family transcriptional regulator. (367 aa)
KKY_3012Rhamnogalacturonides degradation protein RhiN. (359 aa)
dnaE2DNA polymerase III alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1121 aa)
KKY_3262Hypothetical protein. (218 aa)
KKY_3278RNA polymerase, sigma-24 subunit, ECF subfamily protein; Belongs to the sigma-70 factor family. ECF subfamily. (163 aa)
KKY_3432RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (499 aa)
KKY_3623Hypothetical protein. (360 aa)
KKY_3889MobA/MobL family protein. (516 aa)
KKY_483Inositol monophosphatase family protein. (288 aa)
KKY_66RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)
KKY_67Hypothetical protein. (238 aa)
KKY_802RNA polymerase sigma-70 factor, ECF subfamily. (419 aa)
nadENAD synthetase / glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (556 aa)
KKY_946Hypothetical protein. (729 aa)
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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