STRINGSTRING
KKY_2396 KKY_2396 KKY_2250 KKY_2250 KKY_2533 KKY_2533 KKY_66 KKY_66 KKY_3278 KKY_3278 KKY_1280 KKY_1280 KKY_2053 KKY_2053
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KKY_2396Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (175 aa)
KKY_2250RNA polymerase sigma-70 factor, ECF subfamily. (177 aa)
KKY_2533Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (191 aa)
KKY_66RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)
KKY_3278RNA polymerase, sigma-24 subunit, ECF subfamily protein; Belongs to the sigma-70 factor family. ECF subfamily. (163 aa)
KKY_1280RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
KKY_2053RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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