STRINGSTRING
fadN fadN GNIT_0230 GNIT_0230 fadA fadA fadJ fadJ fadN-2 fadN-2 GNIT_1701 GNIT_1701 fadE fadE scoA scoA scoB scoB GNIT_2580 GNIT_2580 fadB fadB fadA-2 fadA-2 GNIT_3171 GNIT_3171
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fadNFatty oxidation complex, alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family. (702 aa)
GNIT_0230Beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
fadA3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (436 aa)
fadJMultifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (702 aa)
fadN-23-hydroxyacyl-CoA dehydrogenase, NAD-binding protein. (704 aa)
GNIT_1701acetyl-CoA acetyltransferase with thiolase domain; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
fadEacyl-CoA dehydrogenase. (826 aa)
scoAPutative succinyl-CoA transferase, alpha subunit. (234 aa)
scoBsuccinyl-CoA transferase, beta subunit. (219 aa)
GNIT_2580acyl-CoA dehydrogenase. (757 aa)
fadBMultifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (719 aa)
fadA-23-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (386 aa)
GNIT_3171acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
Your Current Organism:
Glaciecola nitratireducens
NCBI taxonomy Id: 1085623
Other names: G. nitratireducens FR1064, Glaciecola nitratireducens FR1064, Glaciecola nitratireducens str. FR1064, Glaciecola nitratireducens strain FR1064, Glaciecola sp. FR1064
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.