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GNIT_2580 GNIT_2580 wecC wecC dapB dapB sdhC sdhC sdhD sdhD sdhA sdhA fabV fabV hemN hemN GNIT_1224 GNIT_1224 dusC dusC hemN-2 hemN-2 GNIT_1556 GNIT_1556 GNIT_1562 GNIT_1562 ivd ivd dusB dusB aidB aidB cysG cysG GNIT_2830 GNIT_2830 GNIT_2628 GNIT_2628 GNIT_2583 GNIT_2583 sdhB sdhB bcd-2 bcd-2 bcd bcd GNIT_1920 GNIT_1920 pyrD pyrD fadE fadE hemF hemF GNIT_0102 GNIT_0102 GNIT_0107 GNIT_0107 GNIT_0108 GNIT_0108 GNIT_0109 GNIT_0109 gcdH gcdH GNIT_0503 GNIT_0503 wbpO wbpO dusA dusA
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
GNIT_2580acyl-CoA dehydrogenase. (757 aa)
wecCUDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (425 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (267 aa)
sdhCSuccinate dehydrogenase, cytochrome b subunit. (92 aa)
sdhDPutative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhC; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (115 aa)
sdhASuccinate dehydrogenase catalytic subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (590 aa)
fabVtrans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. (397 aa)
hemNOxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (410 aa)
GNIT_1224Bifunctional chorismate mutase/prephenate dehydrogenase. (379 aa)
dusCNifR3/Smm1 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily. (308 aa)
hemN-2Coproporphyrinogen III oxidase. (369 aa)
GNIT_1556acyl-CoA dehydrogenase-like protein. (408 aa)
GNIT_1562Acyl-CoA dehydrogenase. (599 aa)
ivdisovaleryl-CoA dehydrogenase. (389 aa)
dusBtRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily. (332 aa)
aidBfadE8. (556 aa)
cysGuroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. (467 aa)
GNIT_2830Putative acyl-CoA dehydrogenase. (586 aa)
GNIT_2628General stress protein. (158 aa)
GNIT_2583acyl-CoA dehydrogenase-like protein. (406 aa)
sdhBSuccinate dehydrogenase catalytic subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (236 aa)
bcd-2Acyl-CoA dehydrogenase family protein. (384 aa)
bcdacyl-CoA dehydrogenase domain-containing protein. (600 aa)
GNIT_1920Zinc-binding alcohol dehydrogenase. (334 aa)
pyrDDihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (302 aa)
fadEacyl-CoA dehydrogenase. (826 aa)
hemFCoproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. (304 aa)
GNIT_0102acyl-CoA dehydrogenase. (388 aa)
GNIT_0107Acyl-CoA dehydrogenase-like protein. (373 aa)
GNIT_0108Acyl-CoA dehydrogenase. (399 aa)
GNIT_0109Acyl-CoA dehydrogenase. (383 aa)
gcdHGlutaryl-CoA dehydrogenase. (393 aa)
GNIT_0503Hypothetical protein. (142 aa)
wbpOVI polysaccharide biosynthesis protein VipA/tviB; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (415 aa)
dusAtRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (300 aa)
Your Current Organism:
Glaciecola nitratireducens
NCBI taxonomy Id: 1085623
Other names: G. nitratireducens FR1064, Glaciecola nitratireducens FR1064, Glaciecola nitratireducens str. FR1064, Glaciecola nitratireducens strain FR1064, Glaciecola sp. FR1064
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