STRINGSTRING
GNIT_3312 GNIT_3312 GNIT_3380 GNIT_3380 GNIT_3572 GNIT_3572 GNIT_3087 GNIT_3087
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GNIT_3312Peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family. (634 aa)
GNIT_3380Peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family. (696 aa)
GNIT_3572Hypothetical protein; Belongs to the peptidase S8 family. (1314 aa)
GNIT_3087Peptidase S8 and S53, subtilisin, kexin, sedolisin. (1625 aa)
Your Current Organism:
Glaciecola nitratireducens
NCBI taxonomy Id: 1085623
Other names: G. nitratireducens FR1064, Glaciecola nitratireducens FR1064, Glaciecola nitratireducens str. FR1064, Glaciecola nitratireducens strain FR1064, Glaciecola sp. FR1064
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