(22 nodes) ClpP/crotonase-like domain superfamily network (Glaciecola nitratireducens)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Your Input:
	paaG-3	enoyl-CoA hydratase. (251 aa)
	sohB	Putative periplasmic protease. (340 aa)
	sppA	Signal peptide peptidase SppA, 67K type. (621 aa)
	paaG-5	enoyl-CoA hydratase. (229 aa)
	accA	acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (318 aa)
	GNIT_3310	Hypothetical protein. (406 aa)
	fadB	Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (719 aa)
	clpP	ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (210 aa)
	GNIT_0910	Hypothetical protein. (282 aa)
	paaG-2	enoyl-CoA hydratase/isomerase. (283 aa)
	GNIT_0434	Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family. (1093 aa)
	fadN	Fatty oxidation complex, alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family. (702 aa)
	paaG	enoyl-CoA hydratase. (287 aa)
	fadJ	Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (702 aa)
	GNIT_1408	propionyl-CoA carboxylase. (510 aa)
	accD	acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (288 aa)
	GNIT_1500	Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family. (1131 aa)
	fadN-2	3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein. (704 aa)
	liuC	enoyl-CoA hydratase/isomerase. (264 aa)
	GNIT_1698	propionyl-CoA carboxylase. (535 aa)
	prc	Carboxy-terminal protease; Belongs to the peptidase S41A family. (687 aa)
	paaG-4	enoyl-CoA hydratase/carnithine racemase. (391 aa)

Your Current Organism:

Glaciecola nitratireducens

NCBI taxonomy Id: 1085623
Other names: G. nitratireducens FR1064, Glaciecola nitratireducens FR1064, Glaciecola nitratireducens str. FR1064, Glaciecola nitratireducens strain FR1064, Glaciecola sp. FR1064

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNIT_1408	GNIT_1698	GNIT_1408	GNIT_1698	propionyl-CoA carboxylase.	propionyl-CoA carboxylase.	0.401
GNIT_1408	accA	GNIT_1408	GNIT_2442	propionyl-CoA carboxylase.	acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.	0.848
GNIT_1408	accD	GNIT_1408	GNIT_1444	propionyl-CoA carboxylase.	acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.	0.933
GNIT_1408	fadB	GNIT_1408	GNIT_2932	propionyl-CoA carboxylase.	Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.	0.724
GNIT_1408	fadJ	GNIT_1408	GNIT_1206	propionyl-CoA carboxylase.	Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	0.756
GNIT_1408	fadN	GNIT_1408	GNIT_0114	propionyl-CoA carboxylase.	Fatty oxidation complex, alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family.	0.777
GNIT_1408	fadN-2	GNIT_1408	GNIT_1561	propionyl-CoA carboxylase.	3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein.	0.765
GNIT_1408	liuC	GNIT_1408	GNIT_1697	propionyl-CoA carboxylase.	enoyl-CoA hydratase/isomerase.	0.613
GNIT_1408	paaG	GNIT_1408	GNIT_0104	propionyl-CoA carboxylase.	enoyl-CoA hydratase.	0.610
GNIT_1408	paaG-2	GNIT_1408	GNIT_0569	propionyl-CoA carboxylase.	enoyl-CoA hydratase/isomerase.	0.486
GNIT_1408	paaG-3	GNIT_1408	GNIT_1909	propionyl-CoA carboxylase.	enoyl-CoA hydratase.	0.467
GNIT_1408	paaG-5	GNIT_1408	GNIT_2178	propionyl-CoA carboxylase.	enoyl-CoA hydratase.	0.454
GNIT_1698	GNIT_1408	GNIT_1698	GNIT_1408	propionyl-CoA carboxylase.	propionyl-CoA carboxylase.	0.401
GNIT_1698	fadB	GNIT_1698	GNIT_2932	propionyl-CoA carboxylase.	Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.	0.957
GNIT_1698	fadJ	GNIT_1698	GNIT_1206	propionyl-CoA carboxylase.	Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	0.957
GNIT_1698	fadN	GNIT_1698	GNIT_0114	propionyl-CoA carboxylase.	Fatty oxidation complex, alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family.	0.594
GNIT_1698	fadN-2	GNIT_1698	GNIT_1561	propionyl-CoA carboxylase.	3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein.	0.594
GNIT_1698	liuC	GNIT_1698	GNIT_1697	propionyl-CoA carboxylase.	enoyl-CoA hydratase/isomerase.	0.991
GNIT_1698	paaG-2	GNIT_1698	GNIT_0569	propionyl-CoA carboxylase.	enoyl-CoA hydratase/isomerase.	0.937
GNIT_1698	paaG-4	GNIT_1698	GNIT_1997	propionyl-CoA carboxylase.	enoyl-CoA hydratase/carnithine racemase.	0.442

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