STRINGSTRING
GNIT_0112 GNIT_0112 GNIT_0186 GNIT_0186 GNIT_1293 GNIT_1293 GNIT_1544 GNIT_1544 fadD-2 fadD-2 GNIT_2384 GNIT_2384 paaK paaK acsA acsA GNIT_2869 GNIT_2869 prpE prpE GNIT_3402 GNIT_3402
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GNIT_0112acyl-CoA synthetase. (615 aa)
GNIT_0186AMP-dependent synthetase and ligase. (717 aa)
GNIT_1293AMP-dependent synthetase and ligase. (545 aa)
GNIT_1544AMP-binding protein. (556 aa)
fadD-2Long-chain acyl-CoA synthetase. (564 aa)
GNIT_2384Hypothetical protein. (877 aa)
paaKPutative CapK protein. (448 aa)
acsAAcetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme); Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (647 aa)
GNIT_2869acetyl-CoA synthetase. (583 aa)
prpEpropionyl-CoA synthetase. (634 aa)
GNIT_3402AMP-binding enzyme, putative. (518 aa)
Your Current Organism:
Glaciecola nitratireducens
NCBI taxonomy Id: 1085623
Other names: G. nitratireducens FR1064, Glaciecola nitratireducens FR1064, Glaciecola nitratireducens str. FR1064, Glaciecola nitratireducens strain FR1064, Glaciecola sp. FR1064
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