22 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_012037	Short chain dehydrogenase family protein. (312 aa)
	ABOM_012011	Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. (458 aa)
	ABOM_011457	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (455 aa)
	ABOM_011459	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (685 aa)
	ABOM_010825	Putative peroxisome biosynthesis protein (PAS10/Peroxin-12). (488 aa)
	ABOM_010411	Peroxisomal membrane anchor protein (Pex14). (371 aa)
	ABOM_009898	Acyl-CoA oxidase. (582 aa)
	ABOM_009346	Acyl-CoA oxidase. (575 aa)
	ABOM_007900	Non-specific lipid-transfer protein. (176 aa)
	ABOM_008178	Putative nuclear serine protease HtrA2/Nma111. (1169 aa)
	ABOM_007504	Peroxisomal dehydratase. (307 aa)
	ABOM_007146	WD repeat protein. (1162 aa)
	ABOM_007802	Peroxisomal hydratase-dehydrogenase-epimerase. (900 aa)
	ABOM_006714	Acetyl-CoA C-acyltransferase. (744 aa)
	ABOM_006289	Peroxisome biosynthesis protein (Peroxin-10). (373 aa)
	ABOM_004844	Uncharacterized protein. (200 aa)
	ABOM_005083	Peroxisome biosynthesis protein (Peroxine-7). (316 aa)
	ABOM_000963	Uncharacterized protein. (763 aa)
	ABOM_000958	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (459 aa)
	ABOM_000440	Peroxisomal targeting receptor pex5. (658 aa)
	ABOM_000433	Peroxisomal membrane protein (Pex13). (446 aa)
	ABOM_000546	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (654 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_000433	ABOM_000440	A0A1F8AH96	A0A1F8AGM0	Peroxisomal membrane protein (Pex13).	Peroxisomal targeting receptor pex5.	0.988
ABOM_000433	ABOM_000546	A0A1F8AH96	A0A1F8AHR6	Peroxisomal membrane protein (Pex13).	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.656
ABOM_000433	ABOM_000958	A0A1F8AH96	A0A1F8AGA0	Peroxisomal membrane protein (Pex13).	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.986
ABOM_000433	ABOM_000963	A0A1F8AH96	A0A1F8AFJ6	Peroxisomal membrane protein (Pex13).	Uncharacterized protein.	0.655
ABOM_000433	ABOM_004844	A0A1F8AH96	A0A1F8A3B4	Peroxisomal membrane protein (Pex13).	Uncharacterized protein.	0.681
ABOM_000433	ABOM_005083	A0A1F8AH96	A0A1F8A5M1	Peroxisomal membrane protein (Pex13).	Peroxisome biosynthesis protein (Peroxine-7).	0.964
ABOM_000433	ABOM_006289	A0A1F8AH96	A0A1F8A1P4	Peroxisomal membrane protein (Pex13).	Peroxisome biosynthesis protein (Peroxin-10).	0.959
ABOM_000433	ABOM_006714	A0A1F8AH96	A0A1F7ZYJ1	Peroxisomal membrane protein (Pex13).	Acetyl-CoA C-acyltransferase.	0.702
ABOM_000433	ABOM_007504	A0A1F8AH96	A0A1F7ZTW5	Peroxisomal membrane protein (Pex13).	Peroxisomal dehydratase.	0.632
ABOM_000433	ABOM_007802	A0A1F8AH96	A0A1F7ZYA9	Peroxisomal membrane protein (Pex13).	Peroxisomal hydratase-dehydrogenase-epimerase.	0.655
ABOM_000433	ABOM_007900	A0A1F8AH96	A0A1F7ZTE1	Peroxisomal membrane protein (Pex13).	Non-specific lipid-transfer protein.	0.986
ABOM_000433	ABOM_008178	A0A1F8AH96	A0A1F7ZTH6	Peroxisomal membrane protein (Pex13).	Putative nuclear serine protease HtrA2/Nma111.	0.656
ABOM_000433	ABOM_009346	A0A1F8AH96	A0A1F7ZRW2	Peroxisomal membrane protein (Pex13).	Acyl-CoA oxidase.	0.722
ABOM_000433	ABOM_009898	A0A1F8AH96	A0A1F7ZRJ8	Peroxisomal membrane protein (Pex13).	Acyl-CoA oxidase.	0.722
ABOM_000433	ABOM_010411	A0A1F8AH96	A0A1F7ZPE8	Peroxisomal membrane protein (Pex13).	Peroxisomal membrane anchor protein (Pex14).	0.999
ABOM_000433	ABOM_010825	A0A1F8AH96	A0A1F7ZLE6	Peroxisomal membrane protein (Pex13).	Putative peroxisome biosynthesis protein (PAS10/Peroxin-12).	0.970
ABOM_000433	ABOM_011457	A0A1F8AH96	A0A1F7ZJM7	Peroxisomal membrane protein (Pex13).	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.986
ABOM_000433	ABOM_011459	A0A1F8AH96	A0A1F7ZJM9	Peroxisomal membrane protein (Pex13).	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.656
ABOM_000433	ABOM_012011	A0A1F8AH96	A0A1F7ZIN8	Peroxisomal membrane protein (Pex13).	Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.986
ABOM_000433	ABOM_012037	A0A1F8AH96	A0A1F7ZII3	Peroxisomal membrane protein (Pex13).	Short chain dehydrogenase family protein.	0.979