STRINGSTRING
ABOM_012123 ABOM_012123 ABOM_011507 ABOM_011507 ABOM_011177 ABOM_011177 ABOM_010810 ABOM_010810 ABOM_009239 ABOM_009239 ABOM_009388 ABOM_009388 ABOM_009172 ABOM_009172 ABOM_007506 ABOM_007506 ABOM_004815 ABOM_004815 ABOM_004771 ABOM_004771 ABOM_001057 ABOM_001057 ABOM_001317 ABOM_001317 ABOM_000947 ABOM_000947
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_012123Proteasome regulatory particle subunit (RpnL). (280 aa)
ABOM_011507VWFA domain-containing protein. (280 aa)
ABOM_011177Proteasome regulatory particle subunit (RpnK). (335 aa)
ABOM_010810Proteasome regulatory particle subunit Rpt6; Belongs to the AAA ATPase family. (389 aa)
ABOM_009239Proteasome regulatory particle subunit Rpt4; Belongs to the AAA ATPase family. (393 aa)
ABOM_009388Proteasome regulatory particle subunit (RpnH). (355 aa)
ABOM_009172Proteasome regulatory particle subunit Rpt3; Belongs to the AAA ATPase family. (415 aa)
ABOM_007506Proteasome regulatory particle subunit Rpt5; Belongs to the AAA ATPase family. (462 aa)
ABOM_004815Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family. (439 aa)
ABOM_004771Proteasome regulatory particle subunit (RpnE). (489 aa)
ABOM_001057WD repeat protein. (1058 aa)
ABOM_001317Proteasome regulatory particle subunit (RpnI). (381 aa)
ABOM_000947Proteasome regulatory particle subunit (RpnG). (491 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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