10 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_011800	Guanine nucleotide-binding protein alpha-3 subunit. (355 aa)
	ABOM_011652	Export control CHS7-like protein. (299 aa)
	ABOM_010105	Developmental regulator flbA. (720 aa)
	ABOM_008904	Guanine nucleotide-binding protein subunit beta. (329 aa)
	ABOM_009607	A-pheromone receptor PreA. (415 aa)
	ABOM_008461	Guanine nucleotide-binding protein subunit gamma. (90 aa)
	ABOM_007651	Guanine nucleotide-binding protein subunit alpha. (359 aa)
	ABOM_006419	Mating-type alpha-pheromone receptor PreB. (369 aa)
	ABOM_005600	Git3 domain-containing protein. (383 aa)
	ABOM_002402	Guanine nucleotide-binding protein subunit alpha. (353 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_002402	ABOM_005600	A0A1F8AAV6	A0A1F8A108	Guanine nucleotide-binding protein subunit alpha.	Git3 domain-containing protein.	0.794
ABOM_002402	ABOM_006419	A0A1F8AAV6	A0A1F8A0Q0	Guanine nucleotide-binding protein subunit alpha.	Mating-type alpha-pheromone receptor PreB.	0.883
ABOM_002402	ABOM_007651	A0A1F8AAV6	A0A1F7ZWI3	Guanine nucleotide-binding protein subunit alpha.	Guanine nucleotide-binding protein subunit alpha.	0.758
ABOM_002402	ABOM_008461	A0A1F8AAV6	A0A1F7ZV43	Guanine nucleotide-binding protein subunit alpha.	Guanine nucleotide-binding protein subunit gamma.	0.819
ABOM_002402	ABOM_008904	A0A1F8AAV6	A0A1F7ZQX4	Guanine nucleotide-binding protein subunit alpha.	Guanine nucleotide-binding protein subunit beta.	0.986
ABOM_002402	ABOM_009607	A0A1F8AAV6	A0A1F7ZTJ6	Guanine nucleotide-binding protein subunit alpha.	A-pheromone receptor PreA.	0.732
ABOM_002402	ABOM_010105	A0A1F8AAV6	A0A1F7ZP47	Guanine nucleotide-binding protein subunit alpha.	Developmental regulator flbA.	0.973
ABOM_002402	ABOM_011800	A0A1F8AAV6	A0A1F7ZIW0	Guanine nucleotide-binding protein subunit alpha.	Guanine nucleotide-binding protein alpha-3 subunit.	0.925
ABOM_005600	ABOM_002402	A0A1F8A108	A0A1F8AAV6	Git3 domain-containing protein.	Guanine nucleotide-binding protein subunit alpha.	0.794
ABOM_005600	ABOM_007651	A0A1F8A108	A0A1F7ZWI3	Git3 domain-containing protein.	Guanine nucleotide-binding protein subunit alpha.	0.794
ABOM_005600	ABOM_008904	A0A1F8A108	A0A1F7ZQX4	Git3 domain-containing protein.	Guanine nucleotide-binding protein subunit beta.	0.958
ABOM_005600	ABOM_010105	A0A1F8A108	A0A1F7ZP47	Git3 domain-containing protein.	Developmental regulator flbA.	0.521
ABOM_005600	ABOM_011652	A0A1F8A108	A0A1F7ZKH1	Git3 domain-containing protein.	Export control CHS7-like protein.	0.794
ABOM_005600	ABOM_011800	A0A1F8A108	A0A1F7ZIW0	Git3 domain-containing protein.	Guanine nucleotide-binding protein alpha-3 subunit.	0.794
ABOM_006419	ABOM_002402	A0A1F8A0Q0	A0A1F8AAV6	Mating-type alpha-pheromone receptor PreB.	Guanine nucleotide-binding protein subunit alpha.	0.883
ABOM_006419	ABOM_007651	A0A1F8A0Q0	A0A1F7ZWI3	Mating-type alpha-pheromone receptor PreB.	Guanine nucleotide-binding protein subunit alpha.	0.883
ABOM_006419	ABOM_008461	A0A1F8A0Q0	A0A1F7ZV43	Mating-type alpha-pheromone receptor PreB.	Guanine nucleotide-binding protein subunit gamma.	0.830
ABOM_006419	ABOM_008904	A0A1F8A0Q0	A0A1F7ZQX4	Mating-type alpha-pheromone receptor PreB.	Guanine nucleotide-binding protein subunit beta.	0.962
ABOM_006419	ABOM_009607	A0A1F8A0Q0	A0A1F7ZTJ6	Mating-type alpha-pheromone receptor PreB.	A-pheromone receptor PreA.	0.661
ABOM_006419	ABOM_010105	A0A1F8A0Q0	A0A1F7ZP47	Mating-type alpha-pheromone receptor PreB.	Developmental regulator flbA.	0.876