7 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_011116	Uncharacterized protein. (339 aa)
	ABOM_011387	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (289 aa)
	ABOM_011710	Sidoreflexin. (337 aa)
	ABOM_010476	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (295 aa)
	ABOM_005845	Uncharacterized protein. (386 aa)
	ABOM_005111	Uncharacterized protein. (626 aa)
	ABOM_001283	Sidoreflexin. (346 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_001283	ABOM_005845	A0A1F8AE80	A0A1F8A0M8	Sidoreflexin.	Uncharacterized protein.	0.588
ABOM_001283	ABOM_011116	A0A1F8AE80	A0A1F7ZLA5	Sidoreflexin.	Uncharacterized protein.	0.588
ABOM_005111	ABOM_005845	A0A1F8A4N8	A0A1F8A0M8	Uncharacterized protein.	Uncharacterized protein.	0.588
ABOM_005111	ABOM_011116	A0A1F8A4N8	A0A1F7ZLA5	Uncharacterized protein.	Uncharacterized protein.	0.659
ABOM_005845	ABOM_001283	A0A1F8A0M8	A0A1F8AE80	Uncharacterized protein.	Sidoreflexin.	0.588
ABOM_005845	ABOM_005111	A0A1F8A0M8	A0A1F8A4N8	Uncharacterized protein.	Uncharacterized protein.	0.588
ABOM_005845	ABOM_011710	A0A1F8A0M8	A0A1F7ZLL9	Uncharacterized protein.	Sidoreflexin.	0.588
ABOM_010476	ABOM_011387	A0A1F7ZNC7	A0A1F7ZLH0	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.	0.701
ABOM_011116	ABOM_001283	A0A1F7ZLA5	A0A1F8AE80	Uncharacterized protein.	Sidoreflexin.	0.588
ABOM_011116	ABOM_005111	A0A1F7ZLA5	A0A1F8A4N8	Uncharacterized protein.	Uncharacterized protein.	0.659
ABOM_011116	ABOM_011710	A0A1F7ZLA5	A0A1F7ZLL9	Uncharacterized protein.	Sidoreflexin.	0.588
ABOM_011387	ABOM_010476	A0A1F7ZLH0	A0A1F7ZNC7	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.	0.701
ABOM_011710	ABOM_005845	A0A1F7ZLL9	A0A1F8A0M8	Sidoreflexin.	Uncharacterized protein.	0.588
ABOM_011710	ABOM_011116	A0A1F7ZLL9	A0A1F7ZLA5	Sidoreflexin.	Uncharacterized protein.	0.588