29 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_012244	WD domain protein. (931 aa)
	ABOM_010658	Small nucleolar ribonucleoprotein complex subunit Utp15. (541 aa)
	ABOM_010188	Putative small nucleolar ribonucleoprotein complex component (Utp5). (847 aa)
	ABOM_010124	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (362 aa)
	ABOM_009787	SnoRNA binding protein. (1015 aa)
	ABOM_010688	Putative rRNA maturation protein (Nop14). (885 aa)
	ABOM_010259	U3 small nucleolar RNA-associated protein 7. (535 aa)
	ABOM_010370	rRNA biogenesis protein RRP5. (1832 aa)
	ABOM_009704	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (697 aa)
	ABOM_007489	Small nucleolar ribonucleoprotein complex subunit (SOF1). (429 aa)
	ABOM_008115	RRP7 superfamily domain-containing protein. (310 aa)
	ABOM_008522	Putative small nucleolar ribonucleoprotein complex subunit. (952 aa)
	ABOM_007576	U3 small nucleolar ribonucleoprotein Lcp5. (384 aa)
	ABOM_006181	Periodic tryptophan protein 2. (900 aa)
	ABOM_006101	Ribosome biogenesis protein BMS1. (1171 aa)
	ABOM_007085	Putative U3 small nucleolar ribonucleoprotein subunit (Imp3). (188 aa)
	ABOM_005365	Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
	ABOM_005537	rRNA processing protein Utp6. (395 aa)
	ABOM_005170	U3 small nucleolar RNA-associated protein 22. (1110 aa)
	ABOM_005218	RNA processing protein Emg1. (262 aa)
	ABOM_005342	Small nucleolar ribonucleoprotein complex subunit. (611 aa)
	ABOM_003730	Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
	ABOM_002395	U3 small nucleolar ribonucleoprotein IMP4. (299 aa)
	ABOM_003049	rRNA-processing protein fcf1. (191 aa)
	ABOM_001376	U3 small nucleolar RNA-associated protein 10. (1802 aa)
	ABOM_001392	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (287 aa)
	ABOM_001000	HEAT repeat protein (DRIM). (2614 aa)
	ABOM_000456	Ribosome biogenesis protein Noc4. (550 aa)
	ABOM_000318	RNA-3'-phosphate cyclase family protein. (402 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_000318	ABOM_000456	A0A1F8AHF8	A0A1F8AG11	RNA-3'-phosphate cyclase family protein.	Ribosome biogenesis protein Noc4.	0.993
ABOM_000318	ABOM_001000	A0A1F8AHF8	A0A1F8AFF2	RNA-3'-phosphate cyclase family protein.	HEAT repeat protein (DRIM).	0.991
ABOM_000318	ABOM_001376	A0A1F8AHF8	A0A1F8AEC2	RNA-3'-phosphate cyclase family protein.	U3 small nucleolar RNA-associated protein 10.	0.997
ABOM_000318	ABOM_001392	A0A1F8AHF8	A0A1F8AEJ8	RNA-3'-phosphate cyclase family protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.974
ABOM_000318	ABOM_002395	A0A1F8AHF8	A0A1F8AA70	RNA-3'-phosphate cyclase family protein.	U3 small nucleolar ribonucleoprotein IMP4.	0.991
ABOM_000318	ABOM_003049	A0A1F8AHF8	A0A1F8ABR2	RNA-3'-phosphate cyclase family protein.	rRNA-processing protein fcf1.	0.991
ABOM_000318	ABOM_003730	A0A1F8AHF8	A0A1F8A5L6	RNA-3'-phosphate cyclase family protein.	Putative small nucleolar ribonucleoprotein complex subunit.	0.989
ABOM_000318	ABOM_005170	A0A1F8AHF8	A0A1F8A2P9	RNA-3'-phosphate cyclase family protein.	U3 small nucleolar RNA-associated protein 22.	0.993
ABOM_000318	ABOM_005218	A0A1F8AHF8	A0A1F8A2R2	RNA-3'-phosphate cyclase family protein.	RNA processing protein Emg1.	0.990
ABOM_000318	ABOM_005342	A0A1F8AHF8	A0A1F8A3P8	RNA-3'-phosphate cyclase family protein.	Small nucleolar ribonucleoprotein complex subunit.	0.997
ABOM_000318	ABOM_005365	A0A1F8AHF8	A0A1F8A1T5	RNA-3'-phosphate cyclase family protein.	Small nucleolar ribonucleoprotein complex subunit Dip2.	0.991
ABOM_000318	ABOM_005537	A0A1F8AHF8	A0A1F8A221	RNA-3'-phosphate cyclase family protein.	rRNA processing protein Utp6.	0.992
ABOM_000318	ABOM_006101	A0A1F8AHF8	A0A1F7ZZN6	RNA-3'-phosphate cyclase family protein.	Ribosome biogenesis protein BMS1.	0.999
ABOM_000318	ABOM_006181	A0A1F8AHF8	A0A1F7ZZC8	RNA-3'-phosphate cyclase family protein.	Periodic tryptophan protein 2.	0.995
ABOM_000318	ABOM_007085	A0A1F8AHF8	A0A1F8A0K0	RNA-3'-phosphate cyclase family protein.	Putative U3 small nucleolar ribonucleoprotein subunit (Imp3).	0.990
ABOM_000318	ABOM_007489	A0A1F8AHF8	A0A1F7ZTX0	RNA-3'-phosphate cyclase family protein.	Small nucleolar ribonucleoprotein complex subunit (SOF1).	0.972
ABOM_000318	ABOM_007576	A0A1F8AHF8	A0A1F7ZXQ2	RNA-3'-phosphate cyclase family protein.	U3 small nucleolar ribonucleoprotein Lcp5.	0.991
ABOM_000318	ABOM_008115	A0A1F8AHF8	A0A1F7ZUV1	RNA-3'-phosphate cyclase family protein.	RRP7 superfamily domain-containing protein.	0.994
ABOM_000318	ABOM_008522	A0A1F8AHF8	A0A1F7ZW02	RNA-3'-phosphate cyclase family protein.	Putative small nucleolar ribonucleoprotein complex subunit.	0.997
ABOM_000318	ABOM_009704	A0A1F8AHF8	A0A1F7ZRX9	RNA-3'-phosphate cyclase family protein.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.982