28 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_011052	Cell morphogenesis protein Las1. (394 aa)
	ABOM_010746	Pre-rRNA-processing protein pno1. (258 aa)
	ABOM_012062	ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family. (498 aa)
	ABOM_006101	Ribosome biogenesis protein BMS1. (1171 aa)
	ABOM_011307	Nucleolar protein nop5. (578 aa)
	ABOM_011051	Uncharacterized protein. (391 aa)
	ABOM_010742	Methyltransferase BUD23. (245 aa)
	ABOM_005415	F-box domain protein. (357 aa)
	ABOM_005365	Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
	ABOM_006272	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (220 aa)
	ABOM_005414	Ribosome biogenesis protein BRX1. (364 aa)
	ABOM_010258	Pre-rRNA processing protein Tsr1. (794 aa)
	ABOM_003049	rRNA-processing protein fcf1. (191 aa)
	ABOM_002269	Putative small nucleolar ribonucleoprotein complex subunit Utp14. (967 aa)
	ABOM_008766	Protein rai1. (368 aa)
	ABOM_000456	Ribosome biogenesis protein Noc4. (550 aa)
	ABOM_000318	RNA-3'-phosphate cyclase family protein. (402 aa)
	ABOM_006604	Uncharacterized protein. (385 aa)
	ABOM_006181	Periodic tryptophan protein 2. (900 aa)
	ABOM_010370	rRNA biogenesis protein RRP5. (1832 aa)
	ABOM_006590	Ribosome biogenesis protein Kri1. (606 aa)
	ABOM_003733	rRNA processing protein RRP9. (621 aa)
	ABOM_003730	Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
	ABOM_008204	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (86 aa)
	ABOM_008509	Putative pre-rRNA processing protein Mrd1. (833 aa)
	ABOM_010259	U3 small nucleolar RNA-associated protein 7. (535 aa)
	ABOM_009769	rRNA processing protein Bystin. (496 aa)
	ABOM_010124	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (362 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_000318	ABOM_000456	A0A1F8AHF8	A0A1F8AG11	RNA-3'-phosphate cyclase family protein.	Ribosome biogenesis protein Noc4.	0.993
ABOM_000318	ABOM_002269	A0A1F8AHF8	A0A1F8ABY4	RNA-3'-phosphate cyclase family protein.	Putative small nucleolar ribonucleoprotein complex subunit Utp14.	0.980
ABOM_000318	ABOM_003049	A0A1F8AHF8	A0A1F8ABR2	RNA-3'-phosphate cyclase family protein.	rRNA-processing protein fcf1.	0.991
ABOM_000318	ABOM_003730	A0A1F8AHF8	A0A1F8A5L6	RNA-3'-phosphate cyclase family protein.	Putative small nucleolar ribonucleoprotein complex subunit.	0.989
ABOM_000318	ABOM_003733	A0A1F8AHF8	A0A1F8A6R9	RNA-3'-phosphate cyclase family protein.	rRNA processing protein RRP9.	0.995
ABOM_000318	ABOM_005365	A0A1F8AHF8	A0A1F8A1T5	RNA-3'-phosphate cyclase family protein.	Small nucleolar ribonucleoprotein complex subunit Dip2.	0.991
ABOM_000318	ABOM_005414	A0A1F8AHF8	A0A1F8A1X1	RNA-3'-phosphate cyclase family protein.	Ribosome biogenesis protein BRX1.	0.804
ABOM_000318	ABOM_005415	A0A1F8AHF8	A0A1F8A1S7	RNA-3'-phosphate cyclase family protein.	F-box domain protein.	0.804
ABOM_000318	ABOM_006101	A0A1F8AHF8	A0A1F7ZZN6	RNA-3'-phosphate cyclase family protein.	Ribosome biogenesis protein BMS1.	0.999
ABOM_000318	ABOM_006181	A0A1F8AHF8	A0A1F7ZZC8	RNA-3'-phosphate cyclase family protein.	Periodic tryptophan protein 2.	0.995
ABOM_000318	ABOM_006272	A0A1F8AHF8	A0A1F8A2N7	RNA-3'-phosphate cyclase family protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.748
ABOM_000318	ABOM_006590	A0A1F8AHF8	A0A1F7ZYQ7	RNA-3'-phosphate cyclase family protein.	Ribosome biogenesis protein Kri1.	0.795
ABOM_000318	ABOM_008509	A0A1F8AHF8	A0A1F7ZU55	RNA-3'-phosphate cyclase family protein.	Putative pre-rRNA processing protein Mrd1.	0.801
ABOM_000318	ABOM_009769	A0A1F8AHF8	A0A1F7ZP91	RNA-3'-phosphate cyclase family protein.	rRNA processing protein Bystin.	0.997
ABOM_000318	ABOM_010124	A0A1F8AHF8	A0A1F7ZP56	RNA-3'-phosphate cyclase family protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.987
ABOM_000318	ABOM_010258	A0A1F8AHF8	A0A1F7ZQN4	RNA-3'-phosphate cyclase family protein.	Pre-rRNA processing protein Tsr1.	0.909
ABOM_000318	ABOM_010259	A0A1F8AHF8	A0A1F7ZPQ8	RNA-3'-phosphate cyclase family protein.	U3 small nucleolar RNA-associated protein 7.	0.988
ABOM_000318	ABOM_010370	A0A1F8AHF8	A0A1F7ZQ10	RNA-3'-phosphate cyclase family protein.	rRNA biogenesis protein RRP5.	0.970
ABOM_000318	ABOM_010742	A0A1F8AHF8	A0A1F7ZN16	RNA-3'-phosphate cyclase family protein.	Methyltransferase BUD23.	0.784
ABOM_000318	ABOM_010746	A0A1F8AHF8	A0A1F7ZN51	RNA-3'-phosphate cyclase family protein.	Pre-rRNA-processing protein pno1.	0.976