12 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_011307	Nucleolar protein nop5. (578 aa)
	ABOM_000318	RNA-3'-phosphate cyclase family protein. (402 aa)
	ABOM_000456	Ribosome biogenesis protein Noc4. (550 aa)
	ABOM_002269	Putative small nucleolar ribonucleoprotein complex subunit Utp14. (967 aa)
	ABOM_003733	rRNA processing protein RRP9. (621 aa)
	ABOM_003730	Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
	ABOM_005365	Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
	ABOM_006101	Ribosome biogenesis protein BMS1. (1171 aa)
	ABOM_006181	Periodic tryptophan protein 2. (900 aa)
	ABOM_008509	Putative pre-rRNA processing protein Mrd1. (833 aa)
	ABOM_010370	rRNA biogenesis protein RRP5. (1832 aa)
	ABOM_010259	U3 small nucleolar RNA-associated protein 7. (535 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_000318	ABOM_000456	A0A1F8AHF8	A0A1F8AG11	RNA-3'-phosphate cyclase family protein.	Ribosome biogenesis protein Noc4.	0.993
ABOM_000318	ABOM_002269	A0A1F8AHF8	A0A1F8ABY4	RNA-3'-phosphate cyclase family protein.	Putative small nucleolar ribonucleoprotein complex subunit Utp14.	0.980
ABOM_000318	ABOM_003730	A0A1F8AHF8	A0A1F8A5L6	RNA-3'-phosphate cyclase family protein.	Putative small nucleolar ribonucleoprotein complex subunit.	0.989
ABOM_000318	ABOM_003733	A0A1F8AHF8	A0A1F8A6R9	RNA-3'-phosphate cyclase family protein.	rRNA processing protein RRP9.	0.995
ABOM_000318	ABOM_005365	A0A1F8AHF8	A0A1F8A1T5	RNA-3'-phosphate cyclase family protein.	Small nucleolar ribonucleoprotein complex subunit Dip2.	0.991
ABOM_000318	ABOM_006101	A0A1F8AHF8	A0A1F7ZZN6	RNA-3'-phosphate cyclase family protein.	Ribosome biogenesis protein BMS1.	0.999
ABOM_000318	ABOM_006181	A0A1F8AHF8	A0A1F7ZZC8	RNA-3'-phosphate cyclase family protein.	Periodic tryptophan protein 2.	0.995
ABOM_000318	ABOM_008509	A0A1F8AHF8	A0A1F7ZU55	RNA-3'-phosphate cyclase family protein.	Putative pre-rRNA processing protein Mrd1.	0.801
ABOM_000318	ABOM_010259	A0A1F8AHF8	A0A1F7ZPQ8	RNA-3'-phosphate cyclase family protein.	U3 small nucleolar RNA-associated protein 7.	0.988
ABOM_000318	ABOM_010370	A0A1F8AHF8	A0A1F7ZQ10	RNA-3'-phosphate cyclase family protein.	rRNA biogenesis protein RRP5.	0.970
ABOM_000318	ABOM_011307	A0A1F8AHF8	A0A1F7ZL28	RNA-3'-phosphate cyclase family protein.	Nucleolar protein nop5.	0.988
ABOM_000456	ABOM_000318	A0A1F8AG11	A0A1F8AHF8	Ribosome biogenesis protein Noc4.	RNA-3'-phosphate cyclase family protein.	0.993
ABOM_000456	ABOM_002269	A0A1F8AG11	A0A1F8ABY4	Ribosome biogenesis protein Noc4.	Putative small nucleolar ribonucleoprotein complex subunit Utp14.	0.995
ABOM_000456	ABOM_003730	A0A1F8AG11	A0A1F8A5L6	Ribosome biogenesis protein Noc4.	Putative small nucleolar ribonucleoprotein complex subunit.	0.996
ABOM_000456	ABOM_003733	A0A1F8AG11	A0A1F8A6R9	Ribosome biogenesis protein Noc4.	rRNA processing protein RRP9.	0.997
ABOM_000456	ABOM_005365	A0A1F8AG11	A0A1F8A1T5	Ribosome biogenesis protein Noc4.	Small nucleolar ribonucleoprotein complex subunit Dip2.	0.997
ABOM_000456	ABOM_006101	A0A1F8AG11	A0A1F7ZZN6	Ribosome biogenesis protein Noc4.	Ribosome biogenesis protein BMS1.	0.993
ABOM_000456	ABOM_006181	A0A1F8AG11	A0A1F7ZZC8	Ribosome biogenesis protein Noc4.	Periodic tryptophan protein 2.	0.997
ABOM_000456	ABOM_008509	A0A1F8AG11	A0A1F7ZU55	Ribosome biogenesis protein Noc4.	Putative pre-rRNA processing protein Mrd1.	0.867
ABOM_000456	ABOM_010259	A0A1F8AG11	A0A1F7ZPQ8	Ribosome biogenesis protein Noc4.	U3 small nucleolar RNA-associated protein 7.	0.999