STRINGSTRING
ABOM_000849 ABOM_000849 ABOM_010790 ABOM_010790 ABOM_009862 ABOM_009862 ABOM_010261 ABOM_010261 ABOM_008908 ABOM_008908 ABOM_008756 ABOM_008756 ABOM_010101 ABOM_010101 MED18 MED18 ABOM_009682 ABOM_009682 ABOM_007916 ABOM_007916 ABOM_008939 ABOM_008939 ABOM_008978 ABOM_008978 ABOM_007487 ABOM_007487 ABOM_000323 ABOM_000323 ABOM_000144 ABOM_000144 ABOM_000767 ABOM_000767 ABOM_000469 ABOM_000469 ABOM_000449 ABOM_000449 ABOM_012146 ABOM_012146 ABOM_012084 ABOM_012084 ABOM_011850 ABOM_011850 ABOM_011953 ABOM_011953 ABOM_011864 ABOM_011864 ABOM_011836 ABOM_011836 ABOM_011886 ABOM_011886 ABOM_006708 ABOM_006708 ABOM_008711 ABOM_008711 ABOM_008982 ABOM_008982 ABOM_011424 ABOM_011424 ABOM_011215 ABOM_011215 ABOM_011726 ABOM_011726 ABOM_011096 ABOM_011096 ABOM_011182 ABOM_011182 ABOM_010788 ABOM_010788 ABOM_010878 ABOM_010878 MED5 MED5 ABOM_006100 ABOM_006100 ABOM_005522 ABOM_005522 ABOM_005353 ABOM_005353 ABOM_005259 ABOM_005259 ABOM_004762 ABOM_004762 ABOM_005346 ABOM_005346 ABOM_010572 ABOM_010572 ABOM_010582 ABOM_010582 ABOM_010837 ABOM_010837 MED17 MED17 ABOM_003743 ABOM_003743 ABOM_005082 ABOM_005082 ABOM_003869 ABOM_003869 ABOM_004435 ABOM_004435 MED8 MED8 ABOM_004199 ABOM_004199 ABOM_002808 ABOM_002808 ABOM_003464 ABOM_003464 ABOM_003465 ABOM_003465 ABOM_002487 ABOM_002487 ABOM_003062 ABOM_003062 ABOM_002236 ABOM_002236 ABOM_004044 ABOM_004044 ABOM_001394 ABOM_001394 ABOM_001294 ABOM_001294 ABOM_001126 ABOM_001126 ABOM_000773 ABOM_000773 ABOM_000837 ABOM_000837
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_000849Mediator of RNA polymerase II transcription subunit 13; Component of the SRB8-11 complex. The SRB8-11 complex is a regulatory module of the Mediator complex which is itself involved in regulation of basal and activated RNA polymerase II-dependent transcription. The SRB8-11 complex may be involved in the transcriptional repression of a subset of genes regulated by Mediator. It may inhibit the association of the Mediator complex with RNA polymerase II to form the holoenzyme complex. (1466 aa)
ABOM_010790Transcription initiation factor TFIID complex subunit. (445 aa)
ABOM_009862Abhydrolase_4 domain-containing protein. (504 aa)
ABOM_010261Protein PtaB. (769 aa)
ABOM_008908Uncharacterized protein. (87 aa)
ABOM_008756Transcriptional repressor rco-1. (576 aa)
ABOM_010101Putative transcription factor (SPT8). (651 aa)
MED18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (274 aa)
ABOM_009682RSC complex subunit Sfh1. (565 aa)
ABOM_007916Proteinase. (526 aa)
ABOM_008939Uncharacterized protein. (148 aa)
ABOM_008978Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1077 aa)
ABOM_007487SWI-SNF complex subunit (BAF60b). (472 aa)
ABOM_000323Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. (261 aa)
ABOM_000144CBF/NF-Y family transcription factor. (267 aa)
ABOM_000767Putative helicase. (969 aa)
ABOM_000469Transcription factor (Sin3). (1612 aa)
ABOM_000449FAS1 domain-containing protein. (241 aa)
ABOM_012146Uncharacterized protein. (357 aa)
ABOM_012084Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1112 aa)
ABOM_011850Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (959 aa)
ABOM_011953MADS-box domain-containing protein. (107 aa)
ABOM_011864SAP30_Sin3_bdg domain-containing protein. (231 aa)
ABOM_011836PX domain protein. (895 aa)
ABOM_011886Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (518 aa)
ABOM_006708Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (140 aa)
ABOM_008711Protein sin3b. (93 aa)
ABOM_008982SNF2 family helicase. (1137 aa)
ABOM_011424Uncharacterized protein. (582 aa)
ABOM_011215Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. (325 aa)
ABOM_011726Uncharacterized protein. (942 aa)
ABOM_011096Clock controled protein (Ccg-8). (481 aa)
ABOM_011182SP-RING-type domain-containing protein. (1177 aa)
ABOM_010788Transcription initiation factor TFIID subunit beta. (374 aa)
ABOM_010878RPEL repeat protein. (141 aa)
MED5Mediator of RNA polymerase II transcription subunit 5; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1013 aa)
ABOM_006100Uncharacterized protein. (534 aa)
ABOM_005522Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (354 aa)
ABOM_005353Transcriptional co-activator (Hfi1/Ada1). (423 aa)
ABOM_005259Mediator of RNA polymerase II transcription subunit 12. (1602 aa)
ABOM_004762COP9 signalosome complex subunit 2. (506 aa)
ABOM_005346JmjC domain-containing histone demethylation protein 1. (1413 aa)
ABOM_010572Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (204 aa)
ABOM_010582SNF2 family helicase/ATPase. (1146 aa)
ABOM_010837SWI-SNF complex subunit (Snf5). (804 aa)
MED17Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (637 aa)
ABOM_003743SWR1-complex protein 4. (594 aa)
ABOM_005082DUF1014 domain protein. (220 aa)
ABOM_003869WD-repeat protein. (355 aa)
ABOM_004435Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (764 aa)
MED8Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (245 aa)
ABOM_004199M protein repeat protein. (861 aa)
ABOM_002808Putative cell cycle control protein Cwf15. (116 aa)
ABOM_003464SAGA-associated factor 11; Functions as component of the transcription regulatory histone acetylation (HAT) complex SAGA. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA [...] (310 aa)
ABOM_003465C2HC5 finger protein. (520 aa)
ABOM_002487Protein SPT3. (317 aa)
ABOM_003062Endo-1. (393 aa)
ABOM_002236Transcriptional regulator Ngg1. (653 aa)
ABOM_004044Putative Sin3-associated polypeptide Sap18. (266 aa)
ABOM_001394Transcription initiation factor TFIID. (287 aa)
ABOM_001294WD repeat protein. (641 aa)
ABOM_001126SNF2 family helicase. (924 aa)
ABOM_000773Uncharacterized protein. (180 aa)
ABOM_000837Nuclear pore complex subunit Nup159. (1456 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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