STRINGSTRING
ABOM_002259 ABOM_002259 ABOM_004037 ABOM_004037 ABOM_002238 ABOM_002238 ABOM_002844 ABOM_002844 ABOM_002806 ABOM_002806 ABOM_002642 ABOM_002642 ABOM_004367 ABOM_004367 ABOM_003841 ABOM_003841 ABOM_004214 ABOM_004214 ABOM_004195 ABOM_004195 ABOM_004226 ABOM_004226 ABOM_002652 ABOM_002652 ABOM_002569 ABOM_002569 ABOM_004191 ABOM_004191 ABOM_003733 ABOM_003733 ABOM_003815 ABOM_003815 ABOM_005161 ABOM_005161 YTM1 YTM1 ABOM_003727 ABOM_003727 NOP7 NOP7 ABOM_003730 ABOM_003730 ABOM_004412 ABOM_004412 ABOM_004812 ABOM_004812 ABOM_005157 ABOM_005157 ABOM_005292 ABOM_005292 ABOM_005344 ABOM_005344 ABOM_004562 ABOM_004562 ABOM_004536 ABOM_004536 ABOM_005267 ABOM_005267 ABOM_005342 ABOM_005342 ABOM_005297 ABOM_005297 ABOM_006060 ABOM_006060 FEN1 FEN1 ABOM_005184 ABOM_005184 ABOM_003049 ABOM_003049 ABOM_002355 ABOM_002355 ABOM_002973 ABOM_002973 ABOM_002296 ABOM_002296 ABOM_001988 ABOM_001988 ABOM_002990 ABOM_002990 ABOM_002454 ABOM_002454 ABOM_002514 ABOM_002514 ABOM_002410 ABOM_002410 ABOM_002984 ABOM_002984 ABOM_002396 ABOM_002396 ABOM_002978 ABOM_002978 ABOM_003460 ABOM_003460 ABOM_002047 ABOM_002047 ABOM_002395 ABOM_002395 ABOM_000346 ABOM_000346 ABOM_000226 ABOM_000226 ABOM_000260 ABOM_000260 ABOM_000318 ABOM_000318 ABOM_000686 ABOM_000686 ABOM_000763 ABOM_000763 ABOM_000743 ABOM_000743 ABOM_000411 ABOM_000411 ABOM_000299 ABOM_000299 ABOM_000632 ABOM_000632 ABOM_000637 ABOM_000637 ABOM_001005 ABOM_001005 ABOM_002096 ABOM_002096 ABOM_000456 ABOM_000456 ABOM_001225 ABOM_001225 ABOM_001171 ABOM_001171 ABOM_000995 ABOM_000995 ABOM_001228 ABOM_001228 ABOM_001270 ABOM_001270 ABOM_001000 ABOM_001000 ABOM_000956 ABOM_000956 ABOM_000850 ABOM_000850 ABOM_001230 ABOM_001230 ABOM_001166 ABOM_001166 ABOM_001226 ABOM_001226 ABOM_001199 ABOM_001199 ABOM_001214 ABOM_001214 ABOM_005377 ABOM_005377 ABOM_005365 ABOM_005365 ABOM_005415 ABOM_005415 ABOM_006527 ABOM_006527 LSM4 LSM4 NAT10 NAT10 ABOM_006498 ABOM_006498 ABOM_007085 ABOM_007085 ABOM_005857 ABOM_005857 ABOM_005903 ABOM_005903 ABOM_005907 ABOM_005907 ABOM_001392 ABOM_001392 ABOM_005520 ABOM_005520 ABOM_002481 ABOM_002481 ABOM_002437 ABOM_002437 ABOM_003426 ABOM_003426 ABOM_003443 ABOM_003443 ABOM_002738 ABOM_002738 ABOM_003471 ABOM_003471 ABOM_012252 ABOM_012252 ABOM_012259 ABOM_012259 ABOM_012062 ABOM_012062 ABOM_012244 ABOM_012244 ABOM_012014 ABOM_012014 ABOM_011963 ABOM_011963 ABOM_011962 ABOM_011962 ABOM_011755 ABOM_011755 ABOM_011697 ABOM_011697 ABOM_011499 ABOM_011499 ABOM_012055 ABOM_012055 ABOM_011775 ABOM_011775 ABOM_011383 ABOM_011383 ABOM_011366 ABOM_011366 ABOM_011667 ABOM_011667 ABOM_011199 ABOM_011199 ABOM_011150 ABOM_011150 ABOM_011307 ABOM_011307 ABOM_011297 ABOM_011297 ABOM_010852 ABOM_010852 ABOM_010828 ABOM_010828 ABOM_011343 ABOM_011343 ABOM_010928 ABOM_010928 ABOM_011421 ABOM_011421 ABOM_010658 ABOM_010658 ABOM_010941 ABOM_010941 ABOM_010742 ABOM_010742 ABOM_010746 ABOM_010746 ABOM_010016 ABOM_010016 ABOM_010013 ABOM_010013 LSM3 LSM3 ABOM_010226 ABOM_010226 ABOM_010188 ABOM_010188 ABOM_010124 ABOM_010124 ABOM_010138 ABOM_010138 ABOM_009769 ABOM_009769 ABOM_009787 ABOM_009787 ABOM_010688 ABOM_010688 ABOM_010055 ABOM_010055 ABOM_010259 ABOM_010259 SPB1 SPB1 ABOM_010371 ABOM_010371 ABOM_010370 ABOM_010370 ABOM_009556 ABOM_009556 ABOM_008765 ABOM_008765 ABOM_010130 ABOM_010130 ABOM_010258 ABOM_010258 ABOM_009658 ABOM_009658 ABOM_008915 ABOM_008915 ABOM_008909 ABOM_008909 ABOM_009489 ABOM_009489 ABOM_009383 ABOM_009383 ABOM_009677 ABOM_009677 ABOM_008616 ABOM_008616 ABOM_008612 ABOM_008612 ABOM_008600 ABOM_008600 ABOM_009704 ABOM_009704 ABOM_009387 ABOM_009387 ABOM_008271 ABOM_008271 ABOM_008287 ABOM_008287 ABOM_008267 ABOM_008267 ABOM_008273 ABOM_008273 TIF6 TIF6 ABOM_008587 ABOM_008587 ABOM_009181 ABOM_009181 ABOM_007489 ABOM_007489 ABOM_007499 ABOM_007499 ABOM_007527 ABOM_007527 ABOM_007940 ABOM_007940 ABOM_008466 ABOM_008466 ABOM_008509 ABOM_008509 ABOM_008217 ABOM_008217 ABOM_008129 ABOM_008129 ABOM_008127 ABOM_008127 ABOM_008115 ABOM_008115 ABOM_008096 ABOM_008096 ABOM_007500 ABOM_007500 ABOM_008495 ABOM_008495 ABOM_007659 ABOM_007659 ABOM_007807 ABOM_007807 ABOM_008566 ABOM_008566 ABOM_008522 ABOM_008522 ABOM_008797 ABOM_008797 ABOM_006901 ABOM_006901 ABOM_006888 ABOM_006888 ERB1 ERB1 ABOM_007627 ABOM_007627 ABOM_008825 ABOM_008825 ABOM_006870 ABOM_006870 ABOM_007132 ABOM_007132 ABOM_007176 ABOM_007176 ABOM_007175 ABOM_007175 ABOM_008804 ABOM_008804 ABOM_007328 ABOM_007328 ABOM_006913 ABOM_006913 ABOM_007041 ABOM_007041 ABOM_007576 ABOM_007576 ABOM_007201 ABOM_007201 ABOM_006983 ABOM_006983 ABOM_006590 ABOM_006590 ABOM_006608 ABOM_006608 ABOM_006604 ABOM_006604 ABOM_007460 ABOM_007460 ABOM_007481 ABOM_007481 ABOM_007422 ABOM_007422 ABOM_007450 ABOM_007450 ABOM_006181 ABOM_006181 ABOM_006088 ABOM_006088 ABOM_006085 ABOM_006085 ABOM_006086 ABOM_006086 ABOM_006133 ABOM_006133 ABOM_006101 ABOM_006101 ABOM_007105 ABOM_007105 ABOM_005801 ABOM_005801 ABOM_006173 ABOM_006173 ABOM_006683 ABOM_006683 ABOM_005665 ABOM_005665 ABOM_005704 ABOM_005704 ABOM_005174 ABOM_005174 LSM5 LSM5 ABOM_005432 ABOM_005432 ABOM_005218 ABOM_005218 ABOM_005170 ABOM_005170 ABOM_006272 ABOM_006272 ABOM_006293 ABOM_006293 ABOM_006303 ABOM_006303 ABOM_005203 ABOM_005203 ABOM_005201 ABOM_005201 ABOM_005253 ABOM_005253 ABOM_005429 ABOM_005429 ABOM_005537 ABOM_005537 ABOM_006355 ABOM_006355 ABOM_005523 ABOM_005523 ABOM_005373 ABOM_005373 ABOM_005414 ABOM_005414 ABOM_001376 ABOM_001376 ABOM_001462 ABOM_001462 ABOM_001927 ABOM_001927 ABOM_004097 ABOM_004097 ABOM_002300 ABOM_002300 ABOM_003566 ABOM_003566 ABOM_004093 ABOM_004093 ABOM_004052 ABOM_004052 ABOM_002269 ABOM_002269
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_002259Ribosome assembly and transport protein Srp40. (374 aa)
ABOM_004037ATP-dependent RNA helicase dbp6. (872 aa)
ABOM_002238FRG1-like family protein. (276 aa)
ABOM_002844ATP-dependent RNA helicase (Hrh1). (823 aa)
ABOM_002806Exosome complex endonuclease 2/ribosomal RNA processing protein. (309 aa)
ABOM_002642SGL domain-containing protein. (414 aa)
ABOM_004367U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
ABOM_003841Exosome complex subunit Rrp46. (249 aa)
ABOM_004214GTP-binding protein. (545 aa)
ABOM_004195Uncharacterized protein. (787 aa)
ABOM_004226Protein PUF6. (693 aa)
ABOM_002652Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (369 aa)
ABOM_002569Uncharacterized protein. (279 aa)
ABOM_004191CCAAT-box-binding transcription factor. (1125 aa)
ABOM_003733rRNA processing protein RRP9. (621 aa)
ABOM_003815Uncharacterized protein. (240 aa)
ABOM_005161Putative ribosome assembly protein Noc2. (779 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1295 aa)
ABOM_003727Uncharacterized protein. (515 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (682 aa)
ABOM_003730Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
ABOM_004412RNA helicase. (595 aa)
ABOM_004812Nucleolin protein Nsr1. (509 aa)
ABOM_005157ATP-dependent RNA helicase rok1. (727 aa)
ABOM_005292Putative pre-rRNA processing protein Esf1. (719 aa)
ABOM_005344Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
ABOM_004562S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (751 aa)
ABOM_004536Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (792 aa)
ABOM_005267RNA binding protein. (328 aa)
ABOM_005342Small nucleolar ribonucleoprotein complex subunit. (611 aa)
ABOM_005297DNA-directed RNA polymerase I polypeptide. (136 aa)
ABOM_006060Uncharacterized protein. (183 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (399 aa)
ABOM_005184Uncharacterized protein. (481 aa)
ABOM_003049rRNA-processing protein fcf1. (191 aa)
ABOM_002355DNA-directed RNA polymerases I. (73 aa)
ABOM_002973IFN-inducible and antiviral protein. (319 aa)
ABOM_002296Thermotolerance protein. (1269 aa)
ABOM_001988BNR/Asp-box repeat domain protein. (377 aa)
ABOM_002990Thioredoxin. (585 aa)
ABOM_002454Ribosome biogenesis protein Nhp2. (232 aa)
ABOM_002514DNA-directed RNA polymerases I. (214 aa)
ABOM_002410Urb2 domain-containing protein. (1463 aa)
ABOM_002984Exosome complex subunit Csl4. (231 aa)
ABOM_002396BRCT domain protein. (260 aa)
ABOM_002978Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (247 aa)
ABOM_003460RNase_PH domain-containing protein. (413 aa)
ABOM_002047Putative williams-beuren syndrome chromosome region. (216 aa)
ABOM_002395U3 small nucleolar ribonucleoprotein IMP4. (299 aa)
ABOM_000346Pyruvate dehydrogenase (Acetyl-transferring). (385 aa)
ABOM_000226Rpp14 family. (240 aa)
ABOM_000260Uncharacterized protein. (668 aa)
ABOM_000318RNA-3'-phosphate cyclase family protein. (402 aa)
ABOM_000686rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (411 aa)
ABOM_000763Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
ABOM_000743DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (805 aa)
ABOM_000411Nonsense-mediated mRNA decay protein Upf3. (579 aa)
ABOM_000299Ribosome assembly protein rrb1. (487 aa)
ABOM_000632Uncharacterized protein. (728 aa)
ABOM_000637Uncharacterized protein. (396 aa)
ABOM_001005DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1236 aa)
ABOM_002096Putative gibberellin 20-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (296 aa)
ABOM_000456Ribosome biogenesis protein Noc4. (550 aa)
ABOM_001225NIF domain protein. (713 aa)
ABOM_001171Protein MAK16; Belongs to the MAK16 family. (326 aa)
ABOM_000995DNA polymerase V. (985 aa)
ABOM_001228DNA-directed RNA polymerases I and III subunit RPAC2. (146 aa)
ABOM_001270Poly [ADP-ribose] polymerase. (640 aa)
ABOM_001000HEAT repeat protein (DRIM). (2614 aa)
ABOM_000956Smr domain protein. (559 aa)
ABOM_000850WD repeat protein. (720 aa)
ABOM_001230Uncharacterized protein. (190 aa)
ABOM_001166Checkpoint protein; Belongs to the HUS1 family. (338 aa)
ABOM_001226rRNA biogenesis protein rrp36. (349 aa)
ABOM_001199DEAH-box RNA helicase (Dhr1). (1147 aa)
ABOM_001214Urease accessory protein UreF. (321 aa)
ABOM_005377RNA polymerase I-specific transcription initiation factor RRN3 family protein. (701 aa)
ABOM_005365Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
ABOM_005415F-box domain protein. (357 aa)
ABOM_006527DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (856 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (190 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1069 aa)
ABOM_006498RNA binding protein. (411 aa)
ABOM_007085Putative U3 small nucleolar ribonucleoprotein subunit (Imp3). (188 aa)
ABOM_005857ATP-dependent RNA helicase mak5; Belongs to the DEAD box helicase family. (769 aa)
ABOM_005903RNA methylase family protein. (240 aa)
ABOM_005907DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1155 aa)
ABOM_001392U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (287 aa)
ABOM_005520Nucleolar protein 56. (522 aa)
ABOM_002481DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1673 aa)
ABOM_002437Uncharacterized protein. (139 aa)
ABOM_003426Uncharacterized protein. (277 aa)
ABOM_003443DNA-directed RNA polymerase III subunit RPC10. (108 aa)
ABOM_002738CVNH domain-containing protein. (91 aa)
ABOM_003471Ribonuclease P complex subunit Pop1. (882 aa)
ABOM_012252Uncharacterized protein. (88 aa)
ABOM_012259Uncharacterized protein. (88 aa)
ABOM_012062ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family. (498 aa)
ABOM_012244WD domain protein. (931 aa)
ABOM_012014rRNA processing protein gar2. (447 aa)
ABOM_011963Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (687 aa)
ABOM_01196260S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (185 aa)
ABOM_011755Chromosome segregation protein (Pcs1). (518 aa)
ABOM_011697HMG box protein. (329 aa)
ABOM_011499rRNA methyltransferase NOP1. (317 aa)
ABOM_012055ATP-dependent RNA helicase dbp8; Belongs to the DEAD box helicase family. (523 aa)
ABOM_011775Nuclear protein involved in pre-rRNA processing. (320 aa)
ABOM_011383Putative ATP dependent RNA helicase (Dob1). (1080 aa)
ABOM_011366Uncharacterized protein. (291 aa)
ABOM_011667rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (114 aa)
ABOM_011199Uncharacterized protein. (283 aa)
ABOM_011150Ribosome biogenesis protein RLP24. (188 aa)
ABOM_011307Nucleolar protein nop5. (578 aa)
ABOM_011297RNA helicase. (638 aa)
ABOM_010852Nucleolar protein 12. (525 aa)
ABOM_010828Pre-rRNA-processing protein esf2. (334 aa)
ABOM_011343Protein bfr2. (558 aa)
ABOM_010928Uncharacterized protein. (283 aa)
ABOM_011421Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (560 aa)
ABOM_010658Small nucleolar ribonucleoprotein complex subunit Utp15. (541 aa)
ABOM_010941Hexose transporter protein. (234 aa)
ABOM_010742Methyltransferase BUD23. (245 aa)
ABOM_010746Pre-rRNA-processing protein pno1. (258 aa)
ABOM_010016Putative ribonuclease P complex subunit Pop2. (311 aa)
ABOM_010013Ribosome biogenesis protein. (331 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
ABOM_010226Uncharacterized protein. (277 aa)
ABOM_010188Putative small nucleolar ribonucleoprotein complex component (Utp5). (847 aa)
ABOM_010124KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (362 aa)
ABOM_010138Nucleolar GTP-binding protein 1. (658 aa)
ABOM_009769rRNA processing protein Bystin. (496 aa)
ABOM_009787SnoRNA binding protein. (1015 aa)
ABOM_010688Putative rRNA maturation protein (Nop14). (885 aa)
ABOM_010055rRNA processing protein Nop9. (707 aa)
ABOM_010259U3 small nucleolar RNA-associated protein 7. (535 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (806 aa)
ABOM_010371Uncharacterized protein. (325 aa)
ABOM_010370rRNA biogenesis protein RRP5. (1832 aa)
ABOM_009556Nuclear protein (Sgd1). (858 aa)
ABOM_008765tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (477 aa)
ABOM_010130Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (515 aa)
ABOM_010258Pre-rRNA processing protein Tsr1. (794 aa)
ABOM_009658CVNH domain-containing protein. (112 aa)
ABOM_008915SRP9-21 domain-containing protein. (149 aa)
ABOM_008909Putative rRNA processing protein (Ebp2). (374 aa)
ABOM_009489DUF1168 domain protein. (196 aa)
ABOM_009383Cupin domain protein. (629 aa)
ABOM_009677Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (355 aa)
ABOM_008616Ribonuclease P protein subunit. (245 aa)
ABOM_008612DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
ABOM_008600Putative ATP dependent RNA helicase (Dbp7); Belongs to the DEAD box helicase family. (760 aa)
ABOM_009704U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (697 aa)
ABOM_009387SWIM-type domain-containing protein. (256 aa)
ABOM_008271Centromere/microtubule-binding protein cbf5. (692 aa)
ABOM_008287RNA processing factor 1. (431 aa)
ABOM_00826725S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family. (287 aa)
ABOM_008273DUF2431 domain-containing protein. (343 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (247 aa)
ABOM_008587CVNH domain-containing protein. (111 aa)
ABOM_009181Proteasome component Prs2. (425 aa)
ABOM_007489Small nucleolar ribonucleoprotein complex subunit (SOF1). (429 aa)
ABOM_007499Ribosome biogenesis protein Ssf2. (448 aa)
ABOM_007527Putative 60S ribosome biogenesis protein Rrp14. (507 aa)
ABOM_007940Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (349 aa)
ABOM_008466DNA-directed RNA polymerases I. (159 aa)
ABOM_008509Putative pre-rRNA processing protein Mrd1. (833 aa)
ABOM_008217Exosome complex endonuclease 1. (269 aa)
ABOM_008129Uncharacterized protein. (1189 aa)
ABOM_008127RNA polymerase I subunit Rpa43. (416 aa)
ABOM_008115RRP7 superfamily domain-containing protein. (310 aa)
ABOM_008096Conserved glycine-rich protein. (253 aa)
ABOM_007500ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (472 aa)
ABOM_008495Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
ABOM_007659Cir_N domain-containing protein. (347 aa)
ABOM_007807DNA ligase. (985 aa)
ABOM_008566Ribosome biogenesis protein NSA2. (263 aa)
ABOM_008522Putative small nucleolar ribonucleoprotein complex subunit. (952 aa)
ABOM_008797Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (753 aa)
ABOM_006901Lactonohydrolase. (357 aa)
ABOM_006888AAA family ATPase/60S ribosome export protein Rix7. (741 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (784 aa)
ABOM_007627Protein-tyrosine phosphatase. (594 aa)
ABOM_008825Exosome component 3'-5' exonuclease. (766 aa)
ABOM_006870U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (726 aa)
ABOM_007132RNase3 domain protein. (359 aa)
ABOM_00717620S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (443 aa)
ABOM_007175Putative ribosome biogenesis protein nop10. (67 aa)
ABOM_008804ATP-dependent RNA helicase drs1. (1402 aa)
ABOM_007328Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (302 aa)
ABOM_006913Uncharacterized protein. (986 aa)
ABOM_007041WD repeat-containing protein jip5. (417 aa)
ABOM_007576U3 small nucleolar ribonucleoprotein Lcp5. (384 aa)
ABOM_007201Sas10/Utp3 family protein. (648 aa)
ABOM_006983Uncharacterized protein. (478 aa)
ABOM_006590Ribosome biogenesis protein Kri1. (606 aa)
ABOM_006608Exosome complex exonuclease DIS3; Belongs to the RNR ribonuclease family. (1032 aa)
ABOM_006604Uncharacterized protein. (385 aa)
ABOM_007460Exosome complex exonuclease Rrp40. (272 aa)
ABOM_007481Protein grc3. (831 aa)
ABOM_007422Uncharacterized protein. (119 aa)
ABOM_007450Uncharacterized protein. (213 aa)
ABOM_006181Periodic tryptophan protein 2. (900 aa)
ABOM_006088RNase_PH domain-containing protein. (385 aa)
ABOM_006085Uncharacterized protein. (671 aa)
ABOM_006086Stc1 domain-containing protein. (290 aa)
ABOM_006133DNA-directed RNA polymerases I and III subunit RPAC1. (373 aa)
ABOM_006101Ribosome biogenesis protein BMS1. (1171 aa)
ABOM_007105DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
ABOM_005801Copper homeostasis protein. (270 aa)
ABOM_006173Protein kinase domain-containing protein. (694 aa)
ABOM_006683Ribosome associated DnaJ chaperone Zuotin. (402 aa)
ABOM_005665Lactonohydrolase. (433 aa)
ABOM_005704ATP-dependent RNA helicase dbp9. (606 aa)
ABOM_005174Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1145 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
ABOM_005432WD repeat-containing protein. (505 aa)
ABOM_005218RNA processing protein Emg1. (262 aa)
ABOM_005170U3 small nucleolar RNA-associated protein 22. (1110 aa)
ABOM_006272Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (220 aa)
ABOM_006293Protein required for cell viability Rrp17. (216 aa)
ABOM_006303Topoisomerase family protein TRF4. (684 aa)
ABOM_005203Exosome complex component rrp4. (390 aa)
ABOM_005201RNA binding protein Rnp24. (374 aa)
ABOM_005253Exosome-associated protein. (255 aa)
ABOM_005429SWIB/MDM2 domain protein. (276 aa)
ABOM_005537rRNA processing protein Utp6. (395 aa)
ABOM_006355Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4877 aa)
ABOM_005523RNA binding protein. (1047 aa)
ABOM_005373rRNA processing protein. (313 aa)
ABOM_005414Ribosome biogenesis protein BRX1. (364 aa)
ABOM_001376U3 small nucleolar RNA-associated protein 10. (1802 aa)
ABOM_001462CVNH domain-containing protein. (109 aa)
ABOM_001927Ribosome biogenesis protein Urb1. (1122 aa)
ABOM_004097ATP-dependent RNA helicase DBP10. (926 aa)
ABOM_002300Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (611 aa)
ABOM_003566ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family. (399 aa)
ABOM_004093RNA helicase. (797 aa)
ABOM_004052NOL1/NOP2/sun domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (804 aa)
ABOM_002269Putative small nucleolar ribonucleoprotein complex subunit Utp14. (967 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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