18 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_009391	mRNA cleavage factor complex component Pcf11. (651 aa)
	ABOM_008718	Uncharacterized protein. (793 aa)
	ABOM_008217	Exosome complex endonuclease 1. (269 aa)
	ABOM_007959	Uncharacterized protein. (865 aa)
	ABOM_008618	Putative nucleosome remodeling complex ATPase subunit (Snf2h). (932 aa)
	ABOM_008766	Protein rai1. (368 aa)
	ABOM_001483	Uncharacterized protein. (703 aa)
	ABOM_004017	Endoribonuclease ysh1. (869 aa)
	ABOM_002485	AAA_11 domain-containing protein. (784 aa)
	ABOM_003450	tRNA-splicing endonuclease. (2132 aa)
	ABOM_002878	Uncharacterized protein. (103 aa)
	ABOM_004400	ISWI chromatin-remodeling complex ATPase ISW2. (1122 aa)
	ABOM_005538	RRM domain-containing protein. (869 aa)
	ABOM_005450	Uncharacterized protein. (853 aa)
	ABOM_006516	Uncharacterized protein. (200 aa)
	ABOM_007424	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (474 aa)
	ABOM_007132	RNase3 domain protein. (359 aa)
	ABOM_007152	RNA binding protein Nrd1. (743 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_001483	ABOM_007132	A0A1F8AEL9	A0A1F7ZWZ3	Uncharacterized protein.	RNase3 domain protein.	0.412
ABOM_001483	ABOM_007152	A0A1F8AEL9	A0A1F7ZWG7	Uncharacterized protein.	RNA binding protein Nrd1.	0.715
ABOM_002485	ABOM_007132	A0A1F8AA14	A0A1F7ZWZ3	AAA_11 domain-containing protein.	RNase3 domain protein.	0.412
ABOM_002485	ABOM_007152	A0A1F8AA14	A0A1F7ZWG7	AAA_11 domain-containing protein.	RNA binding protein Nrd1.	0.715
ABOM_002878	ABOM_007132	A0A1F8A8U2	A0A1F7ZWZ3	Uncharacterized protein.	RNase3 domain protein.	0.412
ABOM_002878	ABOM_007152	A0A1F8A8U2	A0A1F7ZWG7	Uncharacterized protein.	RNA binding protein Nrd1.	0.715
ABOM_003450	ABOM_004017	A0A1F8A9C6	A0A1F8ABX9	tRNA-splicing endonuclease.	Endoribonuclease ysh1.	0.515
ABOM_003450	ABOM_005538	A0A1F8A9C6	A0A1F8A213	tRNA-splicing endonuclease.	RRM domain-containing protein.	0.874
ABOM_003450	ABOM_007132	A0A1F8A9C6	A0A1F7ZWZ3	tRNA-splicing endonuclease.	RNase3 domain protein.	0.697
ABOM_003450	ABOM_007152	A0A1F8A9C6	A0A1F7ZWG7	tRNA-splicing endonuclease.	RNA binding protein Nrd1.	0.962
ABOM_003450	ABOM_009391	A0A1F8A9C6	A0A1F7ZR90	tRNA-splicing endonuclease.	mRNA cleavage factor complex component Pcf11.	0.532
ABOM_004017	ABOM_003450	A0A1F8ABX9	A0A1F8A9C6	Endoribonuclease ysh1.	tRNA-splicing endonuclease.	0.515
ABOM_004017	ABOM_007152	A0A1F8ABX9	A0A1F7ZWG7	Endoribonuclease ysh1.	RNA binding protein Nrd1.	0.446
ABOM_004017	ABOM_009391	A0A1F8ABX9	A0A1F7ZR90	Endoribonuclease ysh1.	mRNA cleavage factor complex component Pcf11.	0.986
ABOM_004400	ABOM_007424	A0A1F8A563	A0A1F7ZZY1	ISWI chromatin-remodeling complex ATPase ISW2.	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family.	0.736
ABOM_005450	ABOM_007132	A0A1F8A1U2	A0A1F7ZWZ3	Uncharacterized protein.	RNase3 domain protein.	0.412
ABOM_005450	ABOM_007152	A0A1F8A1U2	A0A1F7ZWG7	Uncharacterized protein.	RNA binding protein Nrd1.	0.715
ABOM_005538	ABOM_003450	A0A1F8A213	A0A1F8A9C6	RRM domain-containing protein.	tRNA-splicing endonuclease.	0.874
ABOM_005538	ABOM_007132	A0A1F8A213	A0A1F7ZWZ3	RRM domain-containing protein.	RNase3 domain protein.	0.573
ABOM_005538	ABOM_007152	A0A1F8A213	A0A1F7ZWG7	RRM domain-containing protein.	RNA binding protein Nrd1.	0.960