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ABOM_007279 ABOM_007279 ABOM_005415 ABOM_005415 ABOM_005848 ABOM_005848 LSM4 LSM4 ABOM_005759 ABOM_005759 ABOM_005781 ABOM_005781 ABOM_007424 ABOM_007424 ABOM_006146 ABOM_006146 ABOM_006181 ABOM_006181 ABOM_007370 ABOM_007370 ABOM_007422 ABOM_007422 ABOM_006596 ABOM_006596 ABOM_006957 ABOM_006957 ABOM_007330 ABOM_007330 ABOM_005941 ABOM_005941 ABOM_007198 ABOM_007198 ABOM_006869 ABOM_006869 ABOM_007308 ABOM_007308 ABOM_007312 ABOM_007312 ABOM_008804 ABOM_008804 ABOM_008798 ABOM_008798 ABOM_007334 ABOM_007334 NIP1 NIP1 ABOM_006850 ABOM_006850 ABOM_007992 ABOM_007992 TIF34 TIF34 ABOM_007550 ABOM_007550 ABOM_008558 ABOM_008558 ABOM_008547 ABOM_008547 ABOM_007133 ABOM_007133 ABOM_007818 ABOM_007818 ABOM_007680 ABOM_007680 ABOM_008629 ABOM_008629 ABOM_008115 ABOM_008115 ABOM_008226 ABOM_008226 ABOM_008473 ABOM_008473 ABOM_008509 ABOM_008509 TIF32 TIF32 ABOM_007928 ABOM_007928 ABOM_007499 ABOM_007499 ABOM_009440 ABOM_009440 ABOM_005414 ABOM_005414 PRT1 PRT1 ABOM_006355 ABOM_006355 ABOM_005504 ABOM_005504 ABOM_006029 ABOM_006029 ABOM_005367 ABOM_005367 ABOM_005394 ABOM_005394 ABOM_005354 ABOM_005354 ABOM_005271 ABOM_005271 ABOM_004768 ABOM_004768 ABOM_004927 ABOM_004927 ABOM_004842 ABOM_004842 ABOM_004530 ABOM_004530 ABOM_005304 ABOM_005304 ABOM_005136 ABOM_005136 ABOM_005327 ABOM_005327 ABOM_004978 ABOM_004978 ABOM_005055 ABOM_005055 ABOM_004409 ABOM_004409 ABOM_003732 ABOM_003732 ABOM_003726 ABOM_003726 ABOM_003699 ABOM_003699 ABOM_003979 ABOM_003979 ABOM_002636 ABOM_002636 ABOM_003708 ABOM_003708 ABOM_004252 ABOM_004252 ABOM_004251 ABOM_004251 ABOM_004288 ABOM_004288 ABOM_003233 ABOM_003233 ABOM_003313 ABOM_003313 ABOM_002819 ABOM_002819 ABOM_002842 ABOM_002842 ABOM_003490 ABOM_003490 ABOM_002479 ABOM_002479 ABOM_003068 ABOM_003068 ABOM_002978 ABOM_002978 ABOM_002998 ABOM_002998 ABOM_002309 ABOM_002309 ABOM_003061 ABOM_003061 ABOM_004043 ABOM_004043 ABOM_003594 ABOM_003594 ABOM_003591 ABOM_003591 ABOM_003578 ABOM_003578 ABOM_002370 ABOM_002370 ABOM_001773 ABOM_001773 ABOM_001934 ABOM_001934 ABOM_001732 ABOM_001732 ABOM_003548 ABOM_003548 ABOM_001495 ABOM_001495 ABOM_001540 ABOM_001540 ABOM_001472 ABOM_001472 ABOM_001763 ABOM_001763 ABOM_001496 ABOM_001496 ABOM_001108 ABOM_001108 ABOM_000587 ABOM_000587 ABOM_000766 ABOM_000766 ABOM_000697 ABOM_000697 ABOM_009445 ABOM_009445 ABOM_008266 ABOM_008266 TIF6 TIF6 ABOM_009362 ABOM_009362 ABOM_009051 ABOM_009051 INT6 INT6 ABOM_009526 ABOM_009526 HCR1 HCR1 ABOM_009802 ABOM_009802 ABOM_010361 ABOM_010361 ABOM_010161 ABOM_010161 ABOM_009662 ABOM_009662 ABOM_009712 ABOM_009712 ABOM_009711 ABOM_009711 ABOM_010370 ABOM_010370 TIF35 TIF35 ABOM_010217 ABOM_010217 ABOM_010138 ABOM_010138 ABOM_010106 ABOM_010106 ABOM_009567 ABOM_009567 ABOM_010200 ABOM_010200 ABOM_010905 ABOM_010905 ABOM_010901 ABOM_010901 ABOM_010013 ABOM_010013 ABOM_010028 ABOM_010028 ABOM_011570 ABOM_011570 ABOM_010904 ABOM_010904 ABOM_011060 ABOM_011060 ABOM_010720 ABOM_010720 ABOM_010674 ABOM_010674 RPS0 RPS0 ABOM_010611 ABOM_010611 ABOM_011114 ABOM_011114 ABOM_010862 ABOM_010862 ABOM_011297 ABOM_011297 ABOM_011430 ABOM_011430 ABOM_011626 ABOM_011626 ABOM_011258 ABOM_011258 ABOM_011377 ABOM_011377 ABOM_011557 ABOM_011557 ABOM_011516 ABOM_011516 ABOM_012013 ABOM_012013 ABOM_011962 ABOM_011962 ABOM_012029 ABOM_012029 ABOM_012259 ABOM_012259 ABOM_012252 ABOM_012252
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_007279Protein kinase domain-containing protein. (237 aa)
ABOM_005415F-box domain protein. (357 aa)
ABOM_005848U1 snRNP splicing complex subunit (Luc7). (278 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (190 aa)
ABOM_005759Uncharacterized protein. (221 aa)
ABOM_005781Protein kinase dsk1. (570 aa)
ABOM_007424ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (474 aa)
ABOM_006146U2 snRNP component prp10. (1231 aa)
ABOM_006181Periodic tryptophan protein 2. (900 aa)
ABOM_007370NmrA-like family protein. (308 aa)
ABOM_007422Uncharacterized protein. (119 aa)
ABOM_006596Uncharacterized protein. (148 aa)
ABOM_006957Ribosome biogenesis GTPase Lsg1. (658 aa)
ABOM_007330Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (365 aa)
ABOM_005941Eukaryotic translation initiation factor 2 subunit beta. (282 aa)
ABOM_007198Uncharacterized protein. (210 aa)
ABOM_006869Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (345 aa)
ABOM_007308Putative 37S ribosomal protein S11. (235 aa)
ABOM_007312Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (181 aa)
ABOM_008804ATP-dependent RNA helicase drs1. (1402 aa)
ABOM_008798Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (214 aa)
ABOM_007334Pre-mRNA-processing ATP-dependent RNA helicase PRP5. (1184 aa)
NIP1Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (862 aa)
ABOM_006850Pre-mRNA-processing factor 17. (598 aa)
ABOM_007992CMGC protein kinase; Belongs to the protein kinase superfamily. (400 aa)
TIF34Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (335 aa)
ABOM_007550Putative serine/threonine protein kinase. (209 aa)
ABOM_008558Polymerase (RNA) II (DNA directed) polypeptide D. (148 aa)
ABOM_008547Glutathione S-transferase. (266 aa)
ABOM_007133PSP family protein. (647 aa)
ABOM_007818Pre-mRNA-splicing factor syf1. (849 aa)
ABOM_007680Pre-mRNA-splicing factor brr2. (2209 aa)
ABOM_008629Protein kinase domain-containing protein. (390 aa)
ABOM_008115RRP7 superfamily domain-containing protein. (310 aa)
ABOM_008226Putative RNA recognition motif containing protein. (291 aa)
ABOM_00847360S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
ABOM_008509Putative pre-rRNA processing protein Mrd1. (833 aa)
TIF32Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1035 aa)
ABOM_007928WD_REPEATS_REGION domain-containing protein. (516 aa)
ABOM_007499Ribosome biogenesis protein Ssf2. (448 aa)
ABOM_009440Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (466 aa)
ABOM_005414Ribosome biogenesis protein BRX1. (364 aa)
PRT1Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (741 aa)
ABOM_006355Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4877 aa)
ABOM_005504Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (251 aa)
ABOM_006029Translation initiation factor 4B. (490 aa)
ABOM_005367TPR domain protein. (424 aa)
ABOM_005394RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (469 aa)
ABOM_005354mRNA splicing factor (Prp1/Zer1). (938 aa)
ABOM_005271Tudor domain-containing protein. (288 aa)
ABOM_00476840S ribosomal protein S27. (82 aa)
ABOM_004927GST N-terminal domain-containing protein. (246 aa)
ABOM_004842NmrA domain-containing protein. (305 aa)
ABOM_004530Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (275 aa)
ABOM_005304Exonuclease domain-containing protein. (753 aa)
ABOM_005136Putative 40s ribosomal protein s28 protein. (68 aa)
ABOM_005327SAGA complex component (Sgf73). (389 aa)
ABOM_004978Uncharacterized protein. (272 aa)
ABOM_005055RNA binding protein Ligatin/Tma64. (651 aa)
ABOM_004409U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (926 aa)
ABOM_003732SnRNP assembly factor. (818 aa)
ABOM_003726Translation initiation factor EF-2 gamma subunit. (513 aa)
ABOM_003699Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (80 aa)
ABOM_003979GST N-terminal domain-containing protein. (275 aa)
ABOM_002636Protein kinase. (145 aa)
ABOM_003708Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family. (379 aa)
ABOM_004252Pre-mRNA-processing factor 31. (498 aa)
ABOM_004251Putative cell cycle control protein (Cwf4). (670 aa)
ABOM_004288Protein kinase domain-containing protein. (299 aa)
ABOM_003233Protein kinase. (434 aa)
ABOM_003313Protein kinase domain protein. (210 aa)
ABOM_002819Eukaryotic translation initiation factor 5. (423 aa)
ABOM_002842Ribosomal_L16 domain-containing protein. (200 aa)
ABOM_003490Eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (149 aa)
ABOM_002479snoRNP assembly factor Naf1. (678 aa)
ABOM_003068HIT finger domain protein. (410 aa)
ABOM_002978Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (247 aa)
ABOM_002998Srpk. (384 aa)
ABOM_002309Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16. (913 aa)
ABOM_003061WD domain. (1570 aa)
ABOM_004043mRNA splicing factor (Prp18). (365 aa)
ABOM_003594Serine protein kinase. (434 aa)
ABOM_003591Protein kinase domain protein. (420 aa)
ABOM_003578Kinase domain-containing protein. (390 aa)
ABOM_002370CWF complex protein sap62. (237 aa)
ABOM_001773Protein kinase domain-containing protein. (373 aa)
ABOM_001934Topoisomerase II associated protein (Pat1). (860 aa)
ABOM_001732Protein kinase domain protein. (431 aa)
ABOM_003548mRNA splicing protein Yju2. (273 aa)
ABOM_001495Protein kinase domain protein. (418 aa)
ABOM_001540Protein kinase domain protein. (414 aa)
ABOM_001472Protein kinase domain-containing protein. (341 aa)
ABOM_001763Protein kinase domain-containing protein. (427 aa)
ABOM_001496Protein kinase. (409 aa)
ABOM_001108Pre-mRNA-splicing factor cwc2. (424 aa)
ABOM_000587Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (95 aa)
ABOM_000766U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (588 aa)
ABOM_000697Protein kinase domain-containing protein. (385 aa)
ABOM_009445Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (583 aa)
ABOM_008266Ribosomal_L23eN domain-containing protein. (154 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (247 aa)
ABOM_009362Pre-mRNA-processing-splicing factor 8. (2353 aa)
ABOM_009051Protein kinase domain-containing protein. (416 aa)
INT6Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (451 aa)
ABOM_009526Uncharacterized protein. (378 aa)
HCR1Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (265 aa)
ABOM_009802F-box domain protein. (651 aa)
ABOM_010361Putative cofactor for methionyl-and glutamyl-tRNA synthetase. (440 aa)
ABOM_010161Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28. (1091 aa)
ABOM_009662NmrA domain-containing protein. (293 aa)
ABOM_009712Sm domain-containing protein. (191 aa)
ABOM_009711Tetratricopeptide repeat domain protein. (566 aa)
ABOM_010370rRNA biogenesis protein RRP5. (1832 aa)
TIF35Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (288 aa)
ABOM_010217RNA-binding protein RBM25. (761 aa)
ABOM_010138Nucleolar GTP-binding protein 1. (658 aa)
ABOM_010106Pol II transcription elongation factor subunit Cdc73. (470 aa)
ABOM_009567RNA polymerase II transcription elongation factor Rtf1p. (600 aa)
ABOM_010200RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (457 aa)
ABOM_010905Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
ABOM_010901Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (476 aa)
ABOM_010013Ribosome biogenesis protein. (331 aa)
ABOM_010028Small nuclear ribonucleoprotein G. (78 aa)
ABOM_011570Kinase domain-containing protein. (217 aa)
ABOM_010904AAR2 family protein. (457 aa)
ABOM_011060Small nuclear ribonucleoprotein Sm D2. (118 aa)
ABOM_010720Isoflavone reductase family protein. (310 aa)
ABOM_010674Pre-mRNA splicing factor (Prp24). (1290 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (299 aa)
ABOM_010611Ribosomal_L18_c domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (1062 aa)
ABOM_011114Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (153 aa)
ABOM_010862Uncharacterized protein. (373 aa)
ABOM_011297RNA helicase. (638 aa)
ABOM_011430mRNA splicing protein (Prp39). (597 aa)
ABOM_011626Uncharacterized protein. (98 aa)
ABOM_011258U5 small nuclear ribonucleoprotein component. (985 aa)
ABOM_011377KH domain protein. (493 aa)
ABOM_011557GTP-binding protein EsdC. (265 aa)
ABOM_011516WD repeat protein. (340 aa)
ABOM_012013Uncharacterized protein. (171 aa)
ABOM_01196260S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (185 aa)
ABOM_012029Protein kinase domain protein; Belongs to the protein kinase superfamily. (409 aa)
ABOM_012259Uncharacterized protein. (88 aa)
ABOM_012252Uncharacterized protein. (88 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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