STRINGSTRING
ABOM_008509 ABOM_008509 ABOM_012244 ABOM_012244 ABOM_011199 ABOM_011199 ABOM_011307 ABOM_011307 ABOM_011343 ABOM_011343 ABOM_010658 ABOM_010658 ABOM_010742 ABOM_010742 ABOM_010746 ABOM_010746 ABOM_010188 ABOM_010188 ABOM_010905 ABOM_010905 ABOM_010911 ABOM_010911 ABOM_006181 ABOM_006181 ABOM_006604 ABOM_006604 ABOM_006590 ABOM_006590 ABOM_007201 ABOM_007201 ABOM_007576 ABOM_007576 ABOM_007308 ABOM_007308 ABOM_007751 ABOM_007751 ABOM_007176 ABOM_007176 ABOM_008522 ABOM_008522 ABOM_007835 ABOM_007835 ABOM_008670 ABOM_008670 ABOM_007500 ABOM_007500 ABOM_008204 ABOM_008204 ABOM_007533 ABOM_007533 ABOM_007489 ABOM_007489 ABOM_008260 ABOM_008260 ABOM_009704 ABOM_009704 ABOM_010258 ABOM_010258 ABOM_010370 ABOM_010370 ABOM_010259 ABOM_010259 ABOM_010688 ABOM_010688 ABOM_009769 ABOM_009769 ABOM_000318 ABOM_000318 ABOM_000686 ABOM_000686 ABOM_000763 ABOM_000763 ABOM_000456 ABOM_000456 ABOM_000848 ABOM_000848 ABOM_000850 ABOM_000850 ABOM_001199 ABOM_001199 ABOM_001302 ABOM_001302 ABOM_002263 ABOM_002263 ABOM_002269 ABOM_002269 ABOM_003049 ABOM_003049 ABOM_002844 ABOM_002844 ABOM_003733 ABOM_003733 ABOM_003730 ABOM_003730 ABOM_005157 ABOM_005157 ABOM_005136 ABOM_005136 ABOM_005344 ABOM_005344 ABOM_005505 ABOM_005505 ABOM_006272 ABOM_006272 ABOM_005537 ABOM_005537 ABOM_005365 ABOM_005365 ABOM_005879 ABOM_005879 NAT10 NAT10 ABOM_006380 ABOM_006380 ABOM_006101 ABOM_006101 ABOM_010124 ABOM_010124
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_008509Putative pre-rRNA processing protein Mrd1. (833 aa)
ABOM_012244WD domain protein. (931 aa)
ABOM_011199Uncharacterized protein. (283 aa)
ABOM_011307Nucleolar protein nop5. (578 aa)
ABOM_011343Protein bfr2. (558 aa)
ABOM_010658Small nucleolar ribonucleoprotein complex subunit Utp15. (541 aa)
ABOM_010742Methyltransferase BUD23. (245 aa)
ABOM_010746Pre-rRNA-processing protein pno1. (258 aa)
ABOM_010188Putative small nucleolar ribonucleoprotein complex component (Utp5). (847 aa)
ABOM_010905Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
ABOM_010911Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (143 aa)
ABOM_006181Periodic tryptophan protein 2. (900 aa)
ABOM_006604Uncharacterized protein. (385 aa)
ABOM_006590Ribosome biogenesis protein Kri1. (606 aa)
ABOM_007201Sas10/Utp3 family protein. (648 aa)
ABOM_007576U3 small nucleolar ribonucleoprotein Lcp5. (384 aa)
ABOM_007308Putative 37S ribosomal protein S11. (235 aa)
ABOM_007751U6 snRNA-associated Sm-like protein LSm7. (133 aa)
ABOM_00717620S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (443 aa)
ABOM_008522Putative small nucleolar ribonucleoprotein complex subunit. (952 aa)
ABOM_007835Serine/threonine-protein kinase rio2. (403 aa)
ABOM_008670Uncharacterized protein. (836 aa)
ABOM_007500ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (472 aa)
ABOM_00820440S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (86 aa)
ABOM_007533RLI and DUF367 domain protein. (321 aa)
ABOM_007489Small nucleolar ribonucleoprotein complex subunit (SOF1). (429 aa)
ABOM_008260Adenylate kinase fap7. (145 aa)
ABOM_009704U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (697 aa)
ABOM_010258Pre-rRNA processing protein Tsr1. (794 aa)
ABOM_010370rRNA biogenesis protein RRP5. (1832 aa)
ABOM_010259U3 small nucleolar RNA-associated protein 7. (535 aa)
ABOM_010688Putative rRNA maturation protein (Nop14). (885 aa)
ABOM_009769rRNA processing protein Bystin. (496 aa)
ABOM_000318RNA-3'-phosphate cyclase family protein. (402 aa)
ABOM_000686rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (411 aa)
ABOM_000763Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
ABOM_000456Ribosome biogenesis protein Noc4. (550 aa)
ABOM_000848Pre-rRNA processing protein. (192 aa)
ABOM_000850WD repeat protein. (720 aa)
ABOM_001199DEAH-box RNA helicase (Dhr1). (1147 aa)
ABOM_001302Uncharacterized protein. (659 aa)
ABOM_00226340S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (432 aa)
ABOM_002269Putative small nucleolar ribonucleoprotein complex subunit Utp14. (967 aa)
ABOM_003049rRNA-processing protein fcf1. (191 aa)
ABOM_002844ATP-dependent RNA helicase (Hrh1). (823 aa)
ABOM_003733rRNA processing protein RRP9. (621 aa)
ABOM_003730Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
ABOM_005157ATP-dependent RNA helicase rok1. (727 aa)
ABOM_005136Putative 40s ribosomal protein s28 protein. (68 aa)
ABOM_005344Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
ABOM_005505Programmed cell death protein 2. (427 aa)
ABOM_006272Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (220 aa)
ABOM_005537rRNA processing protein Utp6. (395 aa)
ABOM_005365Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
ABOM_005879Putative cellular morphogenesis protein (Bud22). (441 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1069 aa)
ABOM_006380Pre-rRNA processing protein Rrp12. (1259 aa)
ABOM_006101Ribosome biogenesis protein BMS1. (1171 aa)
ABOM_010124KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (362 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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