STRINGSTRING
ABOM_010370 ABOM_010370 ABOM_012244 ABOM_012244 ABOM_011307 ABOM_011307 ABOM_010658 ABOM_010658 ABOM_009769 ABOM_009769 ABOM_010688 ABOM_010688 ABOM_010258 ABOM_010258 ABOM_008670 ABOM_008670 ABOM_006870 ABOM_006870 ABOM_007175 ABOM_007175 ABOM_006101 ABOM_006101 ABOM_007424 ABOM_007424 ABOM_007085 ABOM_007085 ABOM_005365 ABOM_005365 ABOM_005537 ABOM_005537 ABOM_005520 ABOM_005520 ABOM_005344 ABOM_005344 ABOM_003730 ABOM_003730 ABOM_003733 ABOM_003733 ABOM_002395 ABOM_002395 ABOM_002454 ABOM_002454 ABOM_004093 ABOM_004093 ABOM_001376 ABOM_001376
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_010370rRNA biogenesis protein RRP5. (1832 aa)
ABOM_012244WD domain protein. (931 aa)
ABOM_011307Nucleolar protein nop5. (578 aa)
ABOM_010658Small nucleolar ribonucleoprotein complex subunit Utp15. (541 aa)
ABOM_009769rRNA processing protein Bystin. (496 aa)
ABOM_010688Putative rRNA maturation protein (Nop14). (885 aa)
ABOM_010258Pre-rRNA processing protein Tsr1. (794 aa)
ABOM_008670Uncharacterized protein. (836 aa)
ABOM_006870U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (726 aa)
ABOM_007175Putative ribosome biogenesis protein nop10. (67 aa)
ABOM_006101Ribosome biogenesis protein BMS1. (1171 aa)
ABOM_007424ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (474 aa)
ABOM_007085Putative U3 small nucleolar ribonucleoprotein subunit (Imp3). (188 aa)
ABOM_005365Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
ABOM_005537rRNA processing protein Utp6. (395 aa)
ABOM_005520Nucleolar protein 56. (522 aa)
ABOM_005344Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
ABOM_003730Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
ABOM_003733rRNA processing protein RRP9. (621 aa)
ABOM_002395U3 small nucleolar ribonucleoprotein IMP4. (299 aa)
ABOM_002454Ribosome biogenesis protein Nhp2. (232 aa)
ABOM_004093RNA helicase. (797 aa)
ABOM_001376U3 small nucleolar RNA-associated protein 10. (1802 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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