23 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_010370	rRNA biogenesis protein RRP5. (1832 aa)
	ABOM_012244	WD domain protein. (931 aa)
	ABOM_011307	Nucleolar protein nop5. (578 aa)
	ABOM_010658	Small nucleolar ribonucleoprotein complex subunit Utp15. (541 aa)
	ABOM_009769	rRNA processing protein Bystin. (496 aa)
	ABOM_010688	Putative rRNA maturation protein (Nop14). (885 aa)
	ABOM_010258	Pre-rRNA processing protein Tsr1. (794 aa)
	ABOM_008670	Uncharacterized protein. (836 aa)
	ABOM_006870	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (726 aa)
	ABOM_007175	Putative ribosome biogenesis protein nop10. (67 aa)
	ABOM_006101	Ribosome biogenesis protein BMS1. (1171 aa)
	ABOM_007424	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (474 aa)
	ABOM_007085	Putative U3 small nucleolar ribonucleoprotein subunit (Imp3). (188 aa)
	ABOM_005365	Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
	ABOM_005537	rRNA processing protein Utp6. (395 aa)
	ABOM_005520	Nucleolar protein 56. (522 aa)
	ABOM_005344	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	ABOM_003730	Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
	ABOM_003733	rRNA processing protein RRP9. (621 aa)
	ABOM_002395	U3 small nucleolar ribonucleoprotein IMP4. (299 aa)
	ABOM_002454	Ribosome biogenesis protein Nhp2. (232 aa)
	ABOM_004093	RNA helicase. (797 aa)
	ABOM_001376	U3 small nucleolar RNA-associated protein 10. (1802 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_001376	ABOM_002395	A0A1F8AEC2	A0A1F8AA70	U3 small nucleolar RNA-associated protein 10.	U3 small nucleolar ribonucleoprotein IMP4.	0.994
ABOM_001376	ABOM_002454	A0A1F8AEC2	A0A1F8AAZ9	U3 small nucleolar RNA-associated protein 10.	Ribosome biogenesis protein Nhp2.	0.940
ABOM_001376	ABOM_003730	A0A1F8AEC2	A0A1F8A5L6	U3 small nucleolar RNA-associated protein 10.	Putative small nucleolar ribonucleoprotein complex subunit.	0.999
ABOM_001376	ABOM_003733	A0A1F8AEC2	A0A1F8A6R9	U3 small nucleolar RNA-associated protein 10.	rRNA processing protein RRP9.	0.998
ABOM_001376	ABOM_004093	A0A1F8AEC2	A0A1F8ABZ3	U3 small nucleolar RNA-associated protein 10.	RNA helicase.	0.935
ABOM_001376	ABOM_005344	A0A1F8AEC2	A0A1F8A4D2	U3 small nucleolar RNA-associated protein 10.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.988
ABOM_001376	ABOM_005365	A0A1F8AEC2	A0A1F8A1T5	U3 small nucleolar RNA-associated protein 10.	Small nucleolar ribonucleoprotein complex subunit Dip2.	0.997
ABOM_001376	ABOM_005520	A0A1F8AEC2	A0A1F8A3C8	U3 small nucleolar RNA-associated protein 10.	Nucleolar protein 56.	0.998
ABOM_001376	ABOM_005537	A0A1F8AEC2	A0A1F8A221	U3 small nucleolar RNA-associated protein 10.	rRNA processing protein Utp6.	0.998
ABOM_001376	ABOM_006101	A0A1F8AEC2	A0A1F7ZZN6	U3 small nucleolar RNA-associated protein 10.	Ribosome biogenesis protein BMS1.	0.999
ABOM_001376	ABOM_006870	A0A1F8AEC2	A0A1F7ZWX7	U3 small nucleolar RNA-associated protein 10.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.904
ABOM_001376	ABOM_007085	A0A1F8AEC2	A0A1F8A0K0	U3 small nucleolar RNA-associated protein 10.	Putative U3 small nucleolar ribonucleoprotein subunit (Imp3).	0.993
ABOM_001376	ABOM_007175	A0A1F8AEC2	A0A1F7ZX30	U3 small nucleolar RNA-associated protein 10.	Putative ribosome biogenesis protein nop10.	0.581
ABOM_001376	ABOM_007424	A0A1F8AEC2	A0A1F7ZZY1	U3 small nucleolar RNA-associated protein 10.	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family.	0.787
ABOM_001376	ABOM_008670	A0A1F8AEC2	A0A1F7ZV20	U3 small nucleolar RNA-associated protein 10.	Uncharacterized protein.	0.624
ABOM_001376	ABOM_009769	A0A1F8AEC2	A0A1F7ZP91	U3 small nucleolar RNA-associated protein 10.	rRNA processing protein Bystin.	0.994
ABOM_001376	ABOM_010258	A0A1F8AEC2	A0A1F7ZQN4	U3 small nucleolar RNA-associated protein 10.	Pre-rRNA processing protein Tsr1.	0.912
ABOM_001376	ABOM_010370	A0A1F8AEC2	A0A1F7ZQ10	U3 small nucleolar RNA-associated protein 10.	rRNA biogenesis protein RRP5.	0.999
ABOM_001376	ABOM_010658	A0A1F8AEC2	A0A1F7ZMC7	U3 small nucleolar RNA-associated protein 10.	Small nucleolar ribonucleoprotein complex subunit Utp15.	0.999
ABOM_001376	ABOM_010688	A0A1F8AEC2	A0A1F7ZPE5	U3 small nucleolar RNA-associated protein 10.	Putative rRNA maturation protein (Nop14).	0.995