STRINGSTRING
ABOM_007085 ABOM_007085 ABOM_011297 ABOM_011297 ABOM_009787 ABOM_009787 ABOM_010688 ABOM_010688 ABOM_009677 ABOM_009677 ABOM_009704 ABOM_009704 ABOM_008509 ABOM_008509 ABOM_008115 ABOM_008115 ABOM_008522 ABOM_008522 ERB1 ERB1 ABOM_007328 ABOM_007328 ABOM_006590 ABOM_006590 ABOM_006181 ABOM_006181 ABOM_006101 ABOM_006101 ABOM_005879 ABOM_005879 ABOM_005365 ABOM_005365 ABOM_005537 ABOM_005537 ABOM_005170 ABOM_005170 ABOM_005342 ABOM_005342 ABOM_003730 ABOM_003730 YTM1 YTM1 ABOM_005161 ABOM_005161 ABOM_002395 ABOM_002395 ABOM_001000 ABOM_001000 ABOM_000456 ABOM_000456 ABOM_000318 ABOM_000318
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_007085Putative U3 small nucleolar ribonucleoprotein subunit (Imp3). (188 aa)
ABOM_011297RNA helicase. (638 aa)
ABOM_009787SnoRNA binding protein. (1015 aa)
ABOM_010688Putative rRNA maturation protein (Nop14). (885 aa)
ABOM_009677Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (355 aa)
ABOM_009704U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (697 aa)
ABOM_008509Putative pre-rRNA processing protein Mrd1. (833 aa)
ABOM_008115RRP7 superfamily domain-containing protein. (310 aa)
ABOM_008522Putative small nucleolar ribonucleoprotein complex subunit. (952 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (784 aa)
ABOM_007328Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (302 aa)
ABOM_006590Ribosome biogenesis protein Kri1. (606 aa)
ABOM_006181Periodic tryptophan protein 2. (900 aa)
ABOM_006101Ribosome biogenesis protein BMS1. (1171 aa)
ABOM_005879Putative cellular morphogenesis protein (Bud22). (441 aa)
ABOM_005365Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
ABOM_005537rRNA processing protein Utp6. (395 aa)
ABOM_005170U3 small nucleolar RNA-associated protein 22. (1110 aa)
ABOM_005342Small nucleolar ribonucleoprotein complex subunit. (611 aa)
ABOM_003730Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1295 aa)
ABOM_005161Putative ribosome assembly protein Noc2. (779 aa)
ABOM_002395U3 small nucleolar ribonucleoprotein IMP4. (299 aa)
ABOM_001000HEAT repeat protein (DRIM). (2614 aa)
ABOM_000456Ribosome biogenesis protein Noc4. (550 aa)
ABOM_000318RNA-3'-phosphate cyclase family protein. (402 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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