13 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_009769	rRNA processing protein Bystin. (496 aa)
	ABOM_000456	Ribosome biogenesis protein Noc4. (550 aa)
	ABOM_001000	HEAT repeat protein (DRIM). (2614 aa)
	ABOM_004161	Ribosomal RNA processing protein. (313 aa)
	ABOM_010688	Putative rRNA maturation protein (Nop14). (885 aa)
	ABOM_010259	U3 small nucleolar RNA-associated protein 7. (535 aa)
	ABOM_010258	Pre-rRNA processing protein Tsr1. (794 aa)
	ABOM_007835	Serine/threonine-protein kinase rio2. (403 aa)
	ABOM_006570	Protein phosphatase; Belongs to the universal ribosomal protein uS3 family. (266 aa)
	ABOM_000686	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (411 aa)
	ABOM_006956	Low-temperature viability protein ltv1. (486 aa)
	ABOM_007176	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (443 aa)
	ABOM_010124	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (362 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_000456	ABOM_000686	A0A1F8AG11	A0A1F8AHC3	Ribosome biogenesis protein Noc4.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.978
ABOM_000456	ABOM_001000	A0A1F8AG11	A0A1F8AFF2	Ribosome biogenesis protein Noc4.	HEAT repeat protein (DRIM).	0.999
ABOM_000456	ABOM_004161	A0A1F8AG11	A0A1F8A7I0	Ribosome biogenesis protein Noc4.	Ribosomal RNA processing protein.	0.915
ABOM_000456	ABOM_006956	A0A1F8AG11	A0A1F7ZYB8	Ribosome biogenesis protein Noc4.	Low-temperature viability protein ltv1.	0.867
ABOM_000456	ABOM_007176	A0A1F8AG11	A0A1F7ZX10	Ribosome biogenesis protein Noc4.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.920
ABOM_000456	ABOM_007835	A0A1F8AG11	A0A1F7ZVF9	Ribosome biogenesis protein Noc4.	Serine/threonine-protein kinase rio2.	0.718
ABOM_000456	ABOM_009769	A0A1F8AG11	A0A1F7ZP91	Ribosome biogenesis protein Noc4.	rRNA processing protein Bystin.	0.998
ABOM_000456	ABOM_010124	A0A1F8AG11	A0A1F7ZP56	Ribosome biogenesis protein Noc4.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
ABOM_000456	ABOM_010258	A0A1F8AG11	A0A1F7ZQN4	Ribosome biogenesis protein Noc4.	Pre-rRNA processing protein Tsr1.	0.815
ABOM_000456	ABOM_010259	A0A1F8AG11	A0A1F7ZPQ8	Ribosome biogenesis protein Noc4.	U3 small nucleolar RNA-associated protein 7.	0.999
ABOM_000456	ABOM_010688	A0A1F8AG11	A0A1F7ZPE5	Ribosome biogenesis protein Noc4.	Putative rRNA maturation protein (Nop14).	0.999
ABOM_000686	ABOM_000456	A0A1F8AHC3	A0A1F8AG11	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Ribosome biogenesis protein Noc4.	0.978
ABOM_000686	ABOM_001000	A0A1F8AHC3	A0A1F8AFF2	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	HEAT repeat protein (DRIM).	0.947
ABOM_000686	ABOM_004161	A0A1F8AHC3	A0A1F8A7I0	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Ribosomal RNA processing protein.	0.833
ABOM_000686	ABOM_006570	A0A1F8AHC3	A0A1F7ZYP6	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Protein phosphatase; Belongs to the universal ribosomal protein uS3 family.	0.955
ABOM_000686	ABOM_006956	A0A1F8AHC3	A0A1F7ZYB8	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Low-temperature viability protein ltv1.	0.984
ABOM_000686	ABOM_007176	A0A1F8AHC3	A0A1F7ZX10	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.964
ABOM_000686	ABOM_007835	A0A1F8AHC3	A0A1F7ZVF9	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Serine/threonine-protein kinase rio2.	0.981
ABOM_000686	ABOM_009769	A0A1F8AHC3	A0A1F7ZP91	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	rRNA processing protein Bystin.	0.998
ABOM_000686	ABOM_010124	A0A1F8AHC3	A0A1F7ZP56	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.881