STRINGSTRING
ABOM_002395 ABOM_002395 ABOM_008287 ABOM_008287 ABOM_008509 ABOM_008509 ABOM_000248 ABOM_000248 ABOM_010370 ABOM_010370 ABOM_008745 ABOM_008745
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_002395U3 small nucleolar ribonucleoprotein IMP4. (299 aa)
ABOM_008287RNA processing factor 1. (431 aa)
ABOM_008509Putative pre-rRNA processing protein Mrd1. (833 aa)
ABOM_000248Uncharacterized protein. (187 aa)
ABOM_010370rRNA biogenesis protein RRP5. (1832 aa)
ABOM_008745Uncharacterized protein. (128 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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