STRINGSTRING
ABOM_000462 ABOM_000462 ABOM_000443 ABOM_000443 ABOM_001005 ABOM_001005 ABOM_001228 ABOM_001228 ABOM_001355 ABOM_001355 ABOM_001093 ABOM_001093 ABOM_009722 ABOM_009722 ABOM_009729 ABOM_009729 ABOM_010274 ABOM_010274 ABOM_010290 ABOM_010290 ABOM_001094 ABOM_001094 ABOM_001411 ABOM_001411 ABOM_001394 ABOM_001394 ABOM_002355 ABOM_002355 ABOM_002514 ABOM_002514 ABOM_002482 ABOM_002482 ABOM_002481 ABOM_002481 ABOM_003443 ABOM_003443 ABOM_004283 ABOM_004283 ABOM_005297 ABOM_005297 ABOM_005226 ABOM_005226 ABOM_005904 ABOM_005904 ABOM_006471 ABOM_006471 ABOM_006519 ABOM_006519 ABOM_006433 ABOM_006433 ABOM_006414 ABOM_006414 ABOM_006158 ABOM_006158 ABOM_011976 ABOM_011976 ABOM_011740 ABOM_011740 ABOM_011538 ABOM_011538 ABOM_011549 ABOM_011549 ABOM_011316 ABOM_011316 ABOM_011423 ABOM_011423 ABOM_011556 ABOM_011556 ABOM_010860 ABOM_010860 ABOM_010788 ABOM_010788 ABOM_010454 ABOM_010454 ABOM_010027 ABOM_010027 ABOM_010790 ABOM_010790 ABOM_009567 ABOM_009567 ABOM_010106 ABOM_010106 ABOM_009780 ABOM_009780 ABOM_007098 ABOM_007098 ABOM_007105 ABOM_007105 ABOM_006133 ABOM_006133 ABOM_007426 ABOM_007426 ABOM_007256 ABOM_007256 ABOM_006983 ABOM_006983 ABOM_007156 ABOM_007156 ABOM_006868 ABOM_006868 ABOM_006885 ABOM_006885 ABOM_006915 ABOM_006915 ABOM_007142 ABOM_007142 ABOM_008558 ABOM_008558 ABOM_008087 ABOM_008087 ABOM_001402 ABOM_001402 ABOM_008127 ABOM_008127 ABOM_009195 ABOM_009195 ABOM_008466 ABOM_008466 ABOM_009429 ABOM_009429 ABOM_008284 ABOM_008284 ABOM_009328 ABOM_009328 ABOM_009349 ABOM_009349 ABOM_008612 ABOM_008612 ABOM_010383 ABOM_010383 ABOM_009971 ABOM_009971 ABOM_009730 ABOM_009730
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_000462Transcription initiation factor IIF subunit beta. (374 aa)
ABOM_000443Uncharacterized protein. (764 aa)
ABOM_001005DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1236 aa)
ABOM_001228DNA-directed RNA polymerases I and III subunit RPAC2. (146 aa)
ABOM_001355Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
ABOM_001093Uncharacterized protein. (651 aa)
ABOM_009722DNA-dependent RNA polymerase family protein. (319 aa)
ABOM_009729Uncharacterized protein. (284 aa)
ABOM_010274DNA-directed RNA polymerase II subunit RPB3. (339 aa)
ABOM_010290Uncharacterized protein. (585 aa)
ABOM_001094DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (245 aa)
ABOM_001411Transcription factor IIA. (405 aa)
ABOM_001394Transcription initiation factor TFIID. (287 aa)
ABOM_002355DNA-directed RNA polymerases I. (73 aa)
ABOM_002514DNA-directed RNA polymerases I. (214 aa)
ABOM_002482TFIIH complex helicase Rad3. (794 aa)
ABOM_002481DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1673 aa)
ABOM_003443DNA-directed RNA polymerase III subunit RPC10. (108 aa)
ABOM_004283Putative transcription initiation factor TFIID subunit 7. (482 aa)
ABOM_005297DNA-directed RNA polymerase I polypeptide. (136 aa)
ABOM_005226Putative transcription initiation factor TFIID subunit 12. (602 aa)
ABOM_005904Trimethylguanosine synthase. (1112 aa)
ABOM_006471Transcription initiation factor TFIID subunit. (740 aa)
ABOM_006519DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (500 aa)
ABOM_006433Bromodomain associated domain protein. (348 aa)
ABOM_006414DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1447 aa)
ABOM_006158Putative TFIIH complex helicase Ssl2. (812 aa)
ABOM_011976RNA polymerase II transcription factor subunit 1. (683 aa)
ABOM_011740DNA primase; Belongs to the eukaryotic-type primase small subunit family. (525 aa)
ABOM_011538Uncharacterized protein. (60 aa)
ABOM_011549DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (324 aa)
ABOM_011316DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (652 aa)
ABOM_011423RNA polymerase II transcription factor B subunit 3. (378 aa)
ABOM_011556DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1204 aa)
ABOM_010860DNA-directed RNA polymerase III subunit RPC8. (193 aa)
ABOM_010788Transcription initiation factor TFIID subunit beta. (374 aa)
ABOM_010454RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (509 aa)
ABOM_010027TATA-binding protein associated factor Taf2. (1247 aa)
ABOM_010790Transcription initiation factor TFIID complex subunit. (445 aa)
ABOM_009567RNA polymerase II transcription elongation factor Rtf1p. (600 aa)
ABOM_010106Pol II transcription elongation factor subunit Cdc73. (470 aa)
ABOM_009780Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (714 aa)
ABOM_007098Transcription factor TFIIE complex alpha subunit. (442 aa)
ABOM_007105DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
ABOM_006133DNA-directed RNA polymerases I and III subunit RPAC1. (373 aa)
ABOM_007426DNA polymerase. (1462 aa)
ABOM_007256Putative transcription factor IIIc-like protein. (631 aa)
ABOM_006983Uncharacterized protein. (478 aa)
ABOM_007156RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (653 aa)
ABOM_006868Transcription initiation factor TFIID subunit 13. (257 aa)
ABOM_006885RNA polymerase-associated protein LEO1. (470 aa)
ABOM_006915WD_REPEATS_REGION domain-containing protein. (253 aa)
ABOM_007142TFIIH basal transcription factor complex p47 subunit. (216 aa)
ABOM_008558Polymerase (RNA) II (DNA directed) polypeptide D. (148 aa)
ABOM_008087Putative cell cycle control protein TINC. (736 aa)
ABOM_001402DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1748 aa)
ABOM_008127RNA polymerase I subunit Rpa43. (416 aa)
ABOM_009195DUF618 domain protein. (417 aa)
ABOM_008466DNA-directed RNA polymerases I. (159 aa)
ABOM_009429Putative DNA-directed RNA polymerase II subunit RPB11a. (125 aa)
ABOM_008284RNA polymerase II transcription elongation factor (Ctr9). (1298 aa)
ABOM_009328Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (281 aa)
ABOM_009349Transcription factor TFIIH complex subunit. (376 aa)
ABOM_008612DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
ABOM_010383DNA-directed RNA polymerase III RPC4. (605 aa)
ABOM_009971RNA polymerase II transcription factor B subunit 5. (73 aa)
ABOM_009730Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (142 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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