STRINGSTRING
ABOM_008281 ABOM_008281 ABOM_001782 ABOM_001782 ABOM_004154 ABOM_004154 ABOM_004254 ABOM_004254 ABOM_004410 ABOM_004410 ABOM_012071 ABOM_012071 ABOM_000683 ABOM_000683
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_008281CorA family metal ion transporter. (611 aa)
ABOM_001782TRP_N domain-containing protein. (635 aa)
ABOM_004154Calcium channel subunit Cch1. (2084 aa)
ABOM_004254DUF907 domain protein. (668 aa)
ABOM_004410DUF907 domain protein. (737 aa)
ABOM_012071Putative potassium ion channel Yvc1. (637 aa)
ABOM_000683TRP_N domain-containing protein. (730 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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