(17 nodes) General transcription initiation factor activity network (Aspergillus bombycis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

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gene fusions

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protein homology

Your Input:
	ABOM_010403	TATA-box-binding protein. (268 aa)
	ABOM_000144	CBF/NF-Y family transcription factor. (267 aa)
	ABOM_001355	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
	ABOM_001212	Transcription factor TFIIIB component. (574 aa)
	ABOM_003409	Negative cofactor 2 complex subunit beta. (142 aa)
	ABOM_005377	RNA polymerase I-specific transcription initiation factor RRN3 family protein. (701 aa)
	ABOM_005904	Trimethylguanosine synthase. (1112 aa)
	ABOM_007073	Putative RNA polymerase II transcription factor SIII (Elongin) subunit A. (382 aa)
	ABOM_006433	Bromodomain associated domain protein. (348 aa)
	ABOM_009101	Transcription initiation factor IIB. (350 aa)
	ABOM_009124	Transcription factor TFIIIC complex subunit Tfc6. (747 aa)
	ABOM_009468	Transcription factor TFIIIB complex subunit Brf1. (758 aa)
	ABOM_009971	RNA polymerase II transcription factor B subunit 5. (73 aa)
	ABOM_009730	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (142 aa)
	ABOM_009780	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (714 aa)
	ABOM_010790	Transcription initiation factor TFIID complex subunit. (445 aa)
	ABOM_011538	Uncharacterized protein. (60 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_000144	ABOM_003409	A0A1F8AHX8	A0A1F8A9E1	CBF/NF-Y family transcription factor.	Negative cofactor 2 complex subunit beta.	0.988
ABOM_000144	ABOM_009101	A0A1F8AHX8	A0A1F7ZS87	CBF/NF-Y family transcription factor.	Transcription initiation factor IIB.	0.689
ABOM_000144	ABOM_010403	A0A1F8AHX8	A0A1F7ZPG1	CBF/NF-Y family transcription factor.	TATA-box-binding protein.	0.983
ABOM_001212	ABOM_005904	A0A1F8AEH3	A0A1F8A1H8	Transcription factor TFIIIB component.	Trimethylguanosine synthase.	0.491
ABOM_001212	ABOM_009101	A0A1F8AEH3	A0A1F7ZS87	Transcription factor TFIIIB component.	Transcription initiation factor IIB.	0.467
ABOM_001212	ABOM_009124	A0A1F8AEH3	A0A1F7ZS74	Transcription factor TFIIIB component.	Transcription factor TFIIIC complex subunit Tfc6.	0.721
ABOM_001212	ABOM_009468	A0A1F8AEH3	A0A1F7ZQJ4	Transcription factor TFIIIB component.	Transcription factor TFIIIB complex subunit Brf1.	0.999
ABOM_001212	ABOM_010403	A0A1F8AEH3	A0A1F7ZPG1	Transcription factor TFIIIB component.	TATA-box-binding protein.	0.999
ABOM_001355	ABOM_005904	A0A1F8AFJ0	A0A1F8A1H8	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Trimethylguanosine synthase.	0.911
ABOM_001355	ABOM_006433	A0A1F8AFJ0	A0A1F8A0P1	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Bromodomain associated domain protein.	0.937
ABOM_001355	ABOM_009101	A0A1F8AFJ0	A0A1F7ZS87	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor IIB.	0.984
ABOM_001355	ABOM_009730	A0A1F8AFJ0	A0A1F7ZQB3	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.963
ABOM_001355	ABOM_009780	A0A1F8AFJ0	A0A1F7ZPA5	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.989
ABOM_001355	ABOM_009971	A0A1F8AFJ0	A0A1F7ZQC5	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	RNA polymerase II transcription factor B subunit 5.	0.985
ABOM_001355	ABOM_010403	A0A1F8AFJ0	A0A1F7ZPG1	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	TATA-box-binding protein.	0.982
ABOM_001355	ABOM_010790	A0A1F8AFJ0	A0A1F7ZNA9	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor TFIID complex subunit.	0.896
ABOM_001355	ABOM_011538	A0A1F8AFJ0	A0A1F7ZJK2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.963
ABOM_003409	ABOM_000144	A0A1F8A9E1	A0A1F8AHX8	Negative cofactor 2 complex subunit beta.	CBF/NF-Y family transcription factor.	0.988
ABOM_003409	ABOM_009101	A0A1F8A9E1	A0A1F7ZS87	Negative cofactor 2 complex subunit beta.	Transcription initiation factor IIB.	0.603
ABOM_003409	ABOM_010403	A0A1F8A9E1	A0A1F7ZPG1	Negative cofactor 2 complex subunit beta.	TATA-box-binding protein.	0.982