STRINGSTRING
ABOM_005462 ABOM_005462 ABOM_006032 ABOM_006032 ABOM_006293 ABOM_006293 ABOM_005170 ABOM_005170 ABOM_005251 ABOM_005251 ABOM_005375 ABOM_005375 ABOM_005704 ABOM_005704 ABOM_005665 ABOM_005665 ABOM_005520 ABOM_005520 ABOM_005342 ABOM_005342 ABOM_005675 ABOM_005675 ABOM_005267 ABOM_005267 ABOM_005344 ABOM_005344 ABOM_005292 ABOM_005292 ABOM_005157 ABOM_005157 ABOM_004569 ABOM_004569 ABOM_004812 ABOM_004812 ABOM_004412 ABOM_004412 ABOM_003727 ABOM_003727 ABOM_002569 ABOM_002569 ABOM_004226 ABOM_004226 ABOM_004214 ABOM_004214 ABOM_002642 ABOM_002642 ABOM_004184 ABOM_004184 ABOM_002847 ABOM_002847 ABOM_002844 ABOM_002844 ABOM_003471 ABOM_003471 ABOM_003426 ABOM_003426 ABOM_002395 ABOM_002395 ABOM_002978 ABOM_002978 ABOM_002430 ABOM_002430 ABOM_002410 ABOM_002410 ABOM_002454 ABOM_002454 ABOM_002293 ABOM_002293 ABOM_002355 ABOM_002355 ABOM_004037 ABOM_004037 ABOM_002259 ABOM_002259 ABOM_004052 ABOM_004052 ABOM_002279 ABOM_002279 ABOM_004097 ABOM_004097 ABOM_001927 ABOM_001927 ABOM_001376 ABOM_001376 ABOM_001230 ABOM_001230 ABOM_001119 ABOM_001119 ABOM_001228 ABOM_001228 ABOM_001171 ABOM_001171 ABOM_001120 ABOM_001120 ABOM_000984 ABOM_000984 ABOM_000632 ABOM_000632 ABOM_000411 ABOM_000411 ABOM_000318 ABOM_000318 ABOM_000248 ABOM_000248 ABOM_000226 ABOM_000226 ABOM_005537 ABOM_005537 ABOM_005429 ABOM_005429 ABOM_011650 ABOM_011650 ABOM_011962 ABOM_011962 ABOM_012014 ABOM_012014 ABOM_012062 ABOM_012062 ABOM_011697 ABOM_011697 ABOM_011499 ABOM_011499 ABOM_012055 ABOM_012055 ABOM_011667 ABOM_011667 ABOM_011199 ABOM_011199 ABOM_011173 ABOM_011173 ABOM_011307 ABOM_011307 ABOM_011297 ABOM_011297 ABOM_010852 ABOM_010852 ABOM_011343 ABOM_011343 ABOM_010928 ABOM_010928 ABOM_010658 ABOM_010658 ABOM_010941 ABOM_010941 ABOM_010742 ABOM_010742 ABOM_010016 ABOM_010016 ABOM_010188 ABOM_010188 ABOM_009787 ABOM_009787 ABOM_009556 ABOM_009556 ABOM_008765 ABOM_008765 ABOM_010130 ABOM_010130 ABOM_009895 ABOM_009895 ABOM_009489 ABOM_009489 ABOM_009671 ABOM_009671 ABOM_009677 ABOM_009677 ABOM_008612 ABOM_008612 ABOM_008600 ABOM_008600 ABOM_009161 ABOM_009161 ABOM_009704 ABOM_009704 ABOM_009387 ABOM_009387 ABOM_008271 ABOM_008271 ABOM_008267 ABOM_008267 ABOM_008273 ABOM_008273 TIF6 TIF6 ABOM_008183 ABOM_008183 ABOM_007546 ABOM_007546 ABOM_007499 ABOM_007499 ABOM_007527 ABOM_007527 ABOM_008466 ABOM_008466 ABOM_008129 ABOM_008129 ABOM_008115 ABOM_008115 ABOM_008670 ABOM_008670 ABOM_007183 ABOM_007183 ABOM_008522 ABOM_008522 ABOM_006901 ABOM_006901 ABOM_006888 ABOM_006888 ABOM_007627 ABOM_007627 ABOM_006870 ABOM_006870 ABOM_007175 ABOM_007175 ABOM_007286 ABOM_007286 ABOM_007328 ABOM_007328 ABOM_006913 ABOM_006913 ABOM_007028 ABOM_007028 ABOM_007215 ABOM_007215 ABOM_007295 ABOM_007295 ABOM_007450 ABOM_007450 ABOM_007438 ABOM_007438 ABOM_006181 ABOM_006181 ABOM_006133 ABOM_006133 ABOM_005857 ABOM_005857 ABOM_005906 ABOM_005906 ABOM_007085 ABOM_007085 ABOM_005415 ABOM_005415 ABOM_005365 ABOM_005365 ABOM_005377 ABOM_005377 ABOM_005414 ABOM_005414 ABOM_005523 ABOM_005523
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_005462HAD_SAK_1 domain-containing protein. (578 aa)
ABOM_006032Putative ribosomal N-lysine methyltransferase. (432 aa)
ABOM_006293Protein required for cell viability Rrp17. (216 aa)
ABOM_005170U3 small nucleolar RNA-associated protein 22. (1110 aa)
ABOM_005251Putative SET domain-containing protein. (407 aa)
ABOM_005375Putative rRNA processing protein Pwp1. (536 aa)
ABOM_005704ATP-dependent RNA helicase dbp9. (606 aa)
ABOM_005665Lactonohydrolase. (433 aa)
ABOM_005520Nucleolar protein 56. (522 aa)
ABOM_005342Small nucleolar ribonucleoprotein complex subunit. (611 aa)
ABOM_005675Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (566 aa)
ABOM_005267RNA binding protein. (328 aa)
ABOM_005344Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
ABOM_005292Putative pre-rRNA processing protein Esf1. (719 aa)
ABOM_005157ATP-dependent RNA helicase rok1. (727 aa)
ABOM_004569Zn(II)2Cys6 transcription factor. (736 aa)
ABOM_004812Nucleolin protein Nsr1. (509 aa)
ABOM_004412RNA helicase. (595 aa)
ABOM_003727Uncharacterized protein. (515 aa)
ABOM_002569Uncharacterized protein. (279 aa)
ABOM_004226Protein PUF6. (693 aa)
ABOM_004214GTP-binding protein. (545 aa)
ABOM_002642SGL domain-containing protein. (414 aa)
ABOM_004184Uncharacterized protein. (1673 aa)
ABOM_002847DUF676 domain-containing protein. (1136 aa)
ABOM_002844ATP-dependent RNA helicase (Hrh1). (823 aa)
ABOM_003471Ribonuclease P complex subunit Pop1. (882 aa)
ABOM_003426Uncharacterized protein. (277 aa)
ABOM_002395U3 small nucleolar ribonucleoprotein IMP4. (299 aa)
ABOM_002978Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (247 aa)
ABOM_002430SesB-related regulatory protein. (362 aa)
ABOM_002410Urb2 domain-containing protein. (1463 aa)
ABOM_002454Ribosome biogenesis protein Nhp2. (232 aa)
ABOM_002293Ubiquitin-60S ribosomal protein L40 fusion protein. (156 aa)
ABOM_002355DNA-directed RNA polymerases I. (73 aa)
ABOM_004037ATP-dependent RNA helicase dbp6. (872 aa)
ABOM_002259Ribosome assembly and transport protein Srp40. (374 aa)
ABOM_004052NOL1/NOP2/sun domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (804 aa)
ABOM_002279RNA polymerase I specific transcription initiation factor Rrn7. (542 aa)
ABOM_004097ATP-dependent RNA helicase DBP10. (926 aa)
ABOM_001927Ribosome biogenesis protein Urb1. (1122 aa)
ABOM_001376U3 small nucleolar RNA-associated protein 10. (1802 aa)
ABOM_001230Uncharacterized protein. (190 aa)
ABOM_001119Uncharacterized protein. (163 aa)
ABOM_001228DNA-directed RNA polymerases I and III subunit RPAC2. (146 aa)
ABOM_001171Protein MAK16; Belongs to the MAK16 family. (326 aa)
ABOM_001120DUF167 domain protein. (131 aa)
ABOM_000984NAD dependent epimerase/dehydratase. (343 aa)
ABOM_000632Uncharacterized protein. (728 aa)
ABOM_000411Nonsense-mediated mRNA decay protein Upf3. (579 aa)
ABOM_000318RNA-3'-phosphate cyclase family protein. (402 aa)
ABOM_000248Uncharacterized protein. (187 aa)
ABOM_000226Rpp14 family. (240 aa)
ABOM_005537rRNA processing protein Utp6. (395 aa)
ABOM_005429SWIB/MDM2 domain protein. (276 aa)
ABOM_011650Putative RING finger domain protein (Rnf10). (644 aa)
ABOM_01196260S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (185 aa)
ABOM_012014rRNA processing protein gar2. (447 aa)
ABOM_012062ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family. (498 aa)
ABOM_011697HMG box protein. (329 aa)
ABOM_011499rRNA methyltransferase NOP1. (317 aa)
ABOM_012055ATP-dependent RNA helicase dbp8; Belongs to the DEAD box helicase family. (523 aa)
ABOM_011667rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (114 aa)
ABOM_011199Uncharacterized protein. (283 aa)
ABOM_011173F-box domain protein. (999 aa)
ABOM_011307Nucleolar protein nop5. (578 aa)
ABOM_011297RNA helicase. (638 aa)
ABOM_010852Nucleolar protein 12. (525 aa)
ABOM_011343Protein bfr2. (558 aa)
ABOM_010928Uncharacterized protein. (283 aa)
ABOM_010658Small nucleolar ribonucleoprotein complex subunit Utp15. (541 aa)
ABOM_010941Hexose transporter protein. (234 aa)
ABOM_010742Methyltransferase BUD23. (245 aa)
ABOM_010016Putative ribonuclease P complex subunit Pop2. (311 aa)
ABOM_010188Putative small nucleolar ribonucleoprotein complex component (Utp5). (847 aa)
ABOM_009787SnoRNA binding protein. (1015 aa)
ABOM_009556Nuclear protein (Sgd1). (858 aa)
ABOM_008765tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (477 aa)
ABOM_010130Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (515 aa)
ABOM_009895Putative pectate lyase. (234 aa)
ABOM_009489DUF1168 domain protein. (196 aa)
ABOM_009671Ribosome biogenesis (Nop4). (728 aa)
ABOM_009677Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (355 aa)
ABOM_008612DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
ABOM_008600Putative ATP dependent RNA helicase (Dbp7); Belongs to the DEAD box helicase family. (760 aa)
ABOM_009161LipA and NB-ARC domain protein. (1502 aa)
ABOM_009704U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (697 aa)
ABOM_009387SWIM-type domain-containing protein. (256 aa)
ABOM_008271Centromere/microtubule-binding protein cbf5. (692 aa)
ABOM_00826725S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family. (287 aa)
ABOM_008273DUF2431 domain-containing protein. (343 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (247 aa)
ABOM_008183DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1695 aa)
ABOM_007546Putative importin beta-3 subunit. (1096 aa)
ABOM_007499Ribosome biogenesis protein Ssf2. (448 aa)
ABOM_007527Putative 60S ribosome biogenesis protein Rrp14. (507 aa)
ABOM_008466DNA-directed RNA polymerases I. (159 aa)
ABOM_008129Uncharacterized protein. (1189 aa)
ABOM_008115RRP7 superfamily domain-containing protein. (310 aa)
ABOM_008670Uncharacterized protein. (836 aa)
ABOM_007183rRNA processing protein RRP15. (301 aa)
ABOM_008522Putative small nucleolar ribonucleoprotein complex subunit. (952 aa)
ABOM_006901Lactonohydrolase. (357 aa)
ABOM_006888AAA family ATPase/60S ribosome export protein Rix7. (741 aa)
ABOM_007627Protein-tyrosine phosphatase. (594 aa)
ABOM_006870U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (726 aa)
ABOM_007175Putative ribosome biogenesis protein nop10. (67 aa)
ABOM_007286HET domain-containing protein. (1145 aa)
ABOM_007328Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (302 aa)
ABOM_006913Uncharacterized protein. (986 aa)
ABOM_007028Ribosomal protein S23 (S12); Belongs to the universal ribosomal protein uS12 family. (145 aa)
ABOM_007215Uncharacterized protein. (175 aa)
ABOM_007295Importin subunit beta-4. (1076 aa)
ABOM_007450Uncharacterized protein. (213 aa)
ABOM_007438Uncharacterized protein. (437 aa)
ABOM_006181Periodic tryptophan protein 2. (900 aa)
ABOM_006133DNA-directed RNA polymerases I and III subunit RPAC1. (373 aa)
ABOM_005857ATP-dependent RNA helicase mak5; Belongs to the DEAD box helicase family. (769 aa)
ABOM_005906FK506-binding protein. (472 aa)
ABOM_007085Putative U3 small nucleolar ribonucleoprotein subunit (Imp3). (188 aa)
ABOM_005415F-box domain protein. (357 aa)
ABOM_005365Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
ABOM_005377RNA polymerase I-specific transcription initiation factor RRN3 family protein. (701 aa)
ABOM_005414Ribosome biogenesis protein BRX1. (364 aa)
ABOM_005523RNA binding protein. (1047 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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