11 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_012216	Retinoblastoma-binding protein. (634 aa)
	ABOM_004741	RRM domain protein. (409 aa)
	ABOM_002830	Polyadenylation factor subunit CstF64. (282 aa)
	ABOM_004017	Endoribonuclease ysh1. (869 aa)
	ABOM_008536	RNA polymerase II subunit A C-terminal domain phosphatase ssu72. (290 aa)
	ABOM_007092	Polyadenylation factor subunit 2. (629 aa)
	ABOM_006466	mRNA 3'-end-processing protein yth1. (255 aa)
	ABOM_005535	Cleavage and polyadenylation specificity factor subunit 2. (1390 aa)
	ABOM_010851	mRNA cleavage and polyadenylation specificity factor complex subunit. (746 aa)
	ABOM_005715	Uncharacterized protein. (257 aa)
	ABOM_011263	Protein cft1. (1388 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_002830	ABOM_004017	A0A1F8A8L1	A0A1F8ABX9	Polyadenylation factor subunit CstF64.	Endoribonuclease ysh1.	0.988
ABOM_002830	ABOM_004741	A0A1F8A8L1	A0A1F8A401	Polyadenylation factor subunit CstF64.	RRM domain protein.	0.450
ABOM_002830	ABOM_005535	A0A1F8A8L1	A0A1F8A2V2	Polyadenylation factor subunit CstF64.	Cleavage and polyadenylation specificity factor subunit 2.	0.986
ABOM_002830	ABOM_006466	A0A1F8A8L1	A0A1F8A1A9	Polyadenylation factor subunit CstF64.	mRNA 3'-end-processing protein yth1.	0.984
ABOM_002830	ABOM_007092	A0A1F8A8L1	A0A1F8A0S5	Polyadenylation factor subunit CstF64.	Polyadenylation factor subunit 2.	0.981
ABOM_002830	ABOM_008536	A0A1F8A8L1	A0A1F7ZW38	Polyadenylation factor subunit CstF64.	RNA polymerase II subunit A C-terminal domain phosphatase ssu72.	0.964
ABOM_002830	ABOM_010851	A0A1F8A8L1	A0A1F7ZL71	Polyadenylation factor subunit CstF64.	mRNA cleavage and polyadenylation specificity factor complex subunit.	0.986
ABOM_002830	ABOM_011263	A0A1F8A8L1	A0A1F7ZKH7	Polyadenylation factor subunit CstF64.	Protein cft1.	0.988
ABOM_002830	ABOM_012216	A0A1F8A8L1	A0A1F7ZIA9	Polyadenylation factor subunit CstF64.	Retinoblastoma-binding protein.	0.944
ABOM_004017	ABOM_002830	A0A1F8ABX9	A0A1F8A8L1	Endoribonuclease ysh1.	Polyadenylation factor subunit CstF64.	0.988
ABOM_004017	ABOM_005535	A0A1F8ABX9	A0A1F8A2V2	Endoribonuclease ysh1.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
ABOM_004017	ABOM_005715	A0A1F8ABX9	A0A1F8A318	Endoribonuclease ysh1.	Uncharacterized protein.	0.959
ABOM_004017	ABOM_006466	A0A1F8ABX9	A0A1F8A1A9	Endoribonuclease ysh1.	mRNA 3'-end-processing protein yth1.	0.998
ABOM_004017	ABOM_007092	A0A1F8ABX9	A0A1F8A0S5	Endoribonuclease ysh1.	Polyadenylation factor subunit 2.	0.999
ABOM_004017	ABOM_008536	A0A1F8ABX9	A0A1F7ZW38	Endoribonuclease ysh1.	RNA polymerase II subunit A C-terminal domain phosphatase ssu72.	0.995
ABOM_004017	ABOM_010851	A0A1F8ABX9	A0A1F7ZL71	Endoribonuclease ysh1.	mRNA cleavage and polyadenylation specificity factor complex subunit.	0.999
ABOM_004017	ABOM_011263	A0A1F8ABX9	A0A1F7ZKH7	Endoribonuclease ysh1.	Protein cft1.	0.999
ABOM_004017	ABOM_012216	A0A1F8ABX9	A0A1F7ZIA9	Endoribonuclease ysh1.	Retinoblastoma-binding protein.	0.998
ABOM_004741	ABOM_002830	A0A1F8A401	A0A1F8A8L1	RRM domain protein.	Polyadenylation factor subunit CstF64.	0.450
ABOM_004741	ABOM_005715	A0A1F8A401	A0A1F8A318	RRM domain protein.	Uncharacterized protein.	0.450