STRINGSTRING
ABOM_002831 ABOM_002831 ABOM_010593 ABOM_010593 ABOM_008876 ABOM_008876 ABOM_006423 ABOM_006423 ABOM_006371 ABOM_006371 ABOM_003487 ABOM_003487 ABOM_000514 ABOM_000514 ABOM_004819 ABOM_004819
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_002831Phenylalanine ammonia-lyase. (720 aa)
ABOM_010593Uncharacterized protein. (480 aa)
ABOM_008876Phenylalanine ammonia-lyase. (742 aa)
ABOM_006423Phenylalanine ammonia-lyase; Belongs to the PAL/histidase family. (1218 aa)
ABOM_006371Exocyst complex protein EXO70. (945 aa)
ABOM_003487Fumarate hydratase. (549 aa)
ABOM_000514Phenylalanine ammonia-lyase. (717 aa)
ABOM_004819Argininosuccinate lyase. (508 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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