STRINGSTRING
ABOM_012152 ABOM_012152 ABOM_012096 ABOM_012096 ABOM_012244 ABOM_012244 ABOM_011850 ABOM_011850 ABOM_011882 ABOM_011882 ABOM_011516 ABOM_011516 ABOM_011515 ABOM_011515 ABOM_012006 ABOM_012006 ABOM_010845 ABOM_010845 ABOM_011560 ABOM_011560 ABOM_010997 ABOM_010997 ABOM_010658 ABOM_010658 ABOM_010296 ABOM_010296 ABOM_010189 ABOM_010189 ABOM_010938 ABOM_010938 ABOM_010755 ABOM_010755 ABOM_009787 ABOM_009787 ABOM_010048 ABOM_010048 ABOM_010259 ABOM_010259 ABOM_010268 ABOM_010268 ABOM_008914 ABOM_008914 ABOM_008918 ABOM_008918 ABOM_010369 ABOM_010369 ABOM_008756 ABOM_008756 ABOM_010109 ABOM_010109 ABOM_009983 ABOM_009983 ABOM_009989 ABOM_009989 ABOM_010101 ABOM_010101 ABOM_008904 ABOM_008904 ABOM_009379 ABOM_009379 ABOM_008763 ABOM_008763 ABOM_009404 ABOM_009404 ABOM_009685 ABOM_009685 ABOM_008601 ABOM_008601 ABOM_009357 ABOM_009357 ABOM_008329 ABOM_008329 ABOM_009013 ABOM_009013 ABOM_007489 ABOM_007489 ABOM_007928 ABOM_007928 TRM82 TRM82 ABOM_008109 ABOM_008109 ABOM_008623 ABOM_008623 ABOM_008885 ABOM_008885 ABOM_007824 ABOM_007824 ABOM_008522 ABOM_008522 ABOM_006899 ABOM_006899 ABOM_006915 ABOM_006915 ERB1 ERB1 ABOM_007588 ABOM_007588 TIF34 TIF34 ABOM_008030 ABOM_008030 ABOM_005970 ABOM_005970 ABOM_006850 ABOM_006850 ABOM_007316 ABOM_007316 CIA1 CIA1 ABOM_007014 ABOM_007014 ABOM_006603 ABOM_006603 ABOM_006183 ABOM_006183 ABOM_006181 ABOM_006181 ABOM_006177 ABOM_006177 ABOM_007092 ABOM_007092 ABOM_006313 ABOM_006313 ABOM_006493 ABOM_006493 ABOM_006494 ABOM_006494 ABOM_006471 ABOM_006471 ABOM_005365 ABOM_005365 ABOM_006363 ABOM_006363 ABOM_005432 ABOM_005432 ABOM_005375 ABOM_005375 ABOM_005673 ABOM_005673 ABOM_005452 ABOM_005452 ABOM_005351 ABOM_005351 ABOM_005342 ABOM_005342 ABOM_004776 ABOM_004776 ABOM_004739 ABOM_004739 ABOM_005040 ABOM_005040 ABOM_004560 ABOM_004560 nudF nudF ABOM_003730 ABOM_003730 ABOM_005083 ABOM_005083 YTM1 YTM1 ABOM_004431 ABOM_004431 ABOM_003869 ABOM_003869 ABOM_003733 ABOM_003733 ABOM_004197 ABOM_004197 ABOM_004184 ABOM_004184 ABOM_003483 ABOM_003483 ABOM_002464 ABOM_002464 ABOM_002945 ABOM_002945 ABOM_002981 ABOM_002981 ABOM_003567 ABOM_003567 ABOM_004103 ABOM_004103 ABOM_001401 ABOM_001401 ABOM_001343 ABOM_001343 ABOM_001057 ABOM_001057 ABOM_001399 ABOM_001399 ABOM_001410 ABOM_001410 ABOM_001009 ABOM_001009 ABOM_000902 ABOM_000902 ABOM_000478 ABOM_000478 ABOM_000967 ABOM_000967 ABOM_000299 ABOM_000299 ABOM_000314 ABOM_000314 ABOM_000228 ABOM_000228 ABOM_000468 ABOM_000468 ABOM_000142 ABOM_000142
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_012152DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (523 aa)
ABOM_012096Chromatin assembly factor 1 subunit B. (718 aa)
ABOM_012244WD domain protein. (931 aa)
ABOM_011850Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (959 aa)
ABOM_011882Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (852 aa)
ABOM_011516WD repeat protein. (340 aa)
ABOM_011515Polyubiquitin binding protein (Doa1/Ufd3). (790 aa)
ABOM_012006Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1206 aa)
ABOM_010845Cytoplasmic dynein intermediate chain. (664 aa)
ABOM_011560F-box and WD domain protein. (850 aa)
ABOM_010997WD repeat protein. (1158 aa)
ABOM_010658Small nucleolar ribonucleoprotein complex subunit Utp15. (541 aa)
ABOM_010296F-box and WD40 domain protein. (673 aa)
ABOM_010189WD domain protein. (864 aa)
ABOM_010938WD repeat protein. (397 aa)
ABOM_010755Putative actin-related protein 2/3 complex subunit 1A. (721 aa)
ABOM_009787SnoRNA binding protein. (1015 aa)
ABOM_010048SNARE-dependent exocytosis protein (Sro7). (999 aa)
ABOM_010259U3 small nucleolar RNA-associated protein 7. (535 aa)
ABOM_010268Protein transport protein sec31. (1280 aa)
ABOM_008914WD repeat protein. (848 aa)
ABOM_008918WD repeat protein. (375 aa)
ABOM_010369WD domain protein. (714 aa)
ABOM_008756Transcriptional repressor rco-1. (576 aa)
ABOM_010109Nuclear pore protein (SEH1); Belongs to the WD repeat SEC13 family. (374 aa)
ABOM_009983NACHT and WD40 domain protein. (1494 aa)
ABOM_009989WD_REPEATS_REGION domain-containing protein. (579 aa)
ABOM_010101Putative transcription factor (SPT8). (651 aa)
ABOM_008904Guanine nucleotide-binding protein subunit beta. (329 aa)
ABOM_009379WD domain protein. (334 aa)
ABOM_008763RNA polymerase II Elongator subunit. (810 aa)
ABOM_009404Chromosome segregation protein (SepB). (842 aa)
ABOM_009685Protein transport protein SEC13; Belongs to the WD repeat SEC13 family. (309 aa)
ABOM_008601WD repeat protein. (420 aa)
ABOM_009357WD repeat protein. (1328 aa)
ABOM_008329Beige/BEACH domain protein. (2522 aa)
ABOM_009013NACHT and WD40 domain protein. (1248 aa)
ABOM_007489Small nucleolar ribonucleoprotein complex subunit (SOF1). (429 aa)
ABOM_007928WD_REPEATS_REGION domain-containing protein. (516 aa)
TRM82tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (838 aa)
ABOM_008109Cell cycle control protein cwf17. (354 aa)
ABOM_008623WD-repeat protein. (1568 aa)
ABOM_008885WD repeat-containing protein mip1. (1384 aa)
ABOM_007824WD repeat protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (1344 aa)
ABOM_008522Putative small nucleolar ribonucleoprotein complex subunit. (952 aa)
ABOM_006899Poly(A)+ RNA export protein. (363 aa)
ABOM_006915WD_REPEATS_REGION domain-containing protein. (253 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (784 aa)
ABOM_007588Pfs domain protein. (772 aa)
TIF34Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (335 aa)
ABOM_008030WD repeat protein. (620 aa)
ABOM_005970Fizzy-related protein. (608 aa)
ABOM_006850Pre-mRNA-processing factor 17. (598 aa)
ABOM_007316NACHT and WD40 domain protein. (1552 aa)
CIA1Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. (1295 aa)
ABOM_007014Protein LST8. (401 aa)
ABOM_006603WD repeat-containing protein. (375 aa)
ABOM_006183WD domain protein. (329 aa)
ABOM_006181Periodic tryptophan protein 2. (900 aa)
ABOM_006177Histone acetyltransferase type B subunit 2. (436 aa)
ABOM_007092Polyadenylation factor subunit 2. (629 aa)
ABOM_006313WD repeat protein. (1050 aa)
ABOM_006493Wd and tetratricopeptide repeat protein. (841 aa)
ABOM_006494Wd and tetratricopeptide repeat protein. (236 aa)
ABOM_006471Transcription initiation factor TFIID subunit. (740 aa)
ABOM_005365Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
ABOM_006363F-box and WD repeat-containing protein. (646 aa)
ABOM_005432WD repeat-containing protein. (505 aa)
ABOM_005375Putative rRNA processing protein Pwp1. (536 aa)
ABOM_005673Putative sulfur metabolite repression control protein SconB. (705 aa)
ABOM_005452Peptidyl-prolyl cis-trans isomerase cyp15. (630 aa)
ABOM_005351Actin cortical patch component. (791 aa)
ABOM_005342Small nucleolar ribonucleoprotein complex subunit. (611 aa)
ABOM_004776Ribosomal assembly complex component Ipi3. (581 aa)
ABOM_004739WD repeat protein. (677 aa)
ABOM_005040WD repeat protein. (374 aa)
ABOM_004560Striatin Pro11. (834 aa)
nudFNuclear distribution protein nudF; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. (463 aa)
ABOM_003730Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
ABOM_005083Peroxisome biosynthesis protein (Peroxine-7). (316 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1295 aa)
ABOM_004431Guanine nucleotide-binding protein subunit beta-like protein. (316 aa)
ABOM_003869WD-repeat protein. (355 aa)
ABOM_003733rRNA processing protein RRP9. (621 aa)
ABOM_004197Pre-mRNA-splicing factor prp46. (452 aa)
ABOM_004184Uncharacterized protein. (1673 aa)
ABOM_003483WD repeat protein. (1451 aa)
ABOM_002464WD repeat protein. (1334 aa)
ABOM_002945Division protein 1. (651 aa)
ABOM_002981Putative cell cycle control protein (Cwf8). (851 aa)
ABOM_003567Catabolite degradation protein. (770 aa)
ABOM_004103Uncharacterized protein. (1612 aa)
ABOM_001401WD domain protein. (479 aa)
ABOM_001343Cell division control protein Cdc4. (1054 aa)
ABOM_001057WD repeat protein. (1058 aa)
ABOM_001399WD domain protein. (360 aa)
ABOM_001410WD repeat-containing protein slp1. (623 aa)
ABOM_001009WD repeat protein. (553 aa)
ABOM_000902WD repeat protein. (981 aa)
ABOM_000478WD repeat protein. (788 aa)
ABOM_000967Rho GTPase 1. (1274 aa)
ABOM_000299Ribosome assembly protein rrb1. (487 aa)
ABOM_000314Pre-mRNA splicing factor. (531 aa)
ABOM_000228Nuclear pore complex subunit. (354 aa)
ABOM_000468Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (453 aa)
ABOM_000142Coronin; Belongs to the WD repeat coronin family. (616 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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