STRINGSTRING
ABOM_007503 ABOM_007503 ABOM_007487 ABOM_007487 ABOM_009352 ABOM_009352 ABOM_009682 ABOM_009682 ABOM_010081 ABOM_010081 ABOM_010866 ABOM_010866 ABOM_011427 ABOM_011427 ABOM_010837 ABOM_010837 ABOM_011020 ABOM_011020 ABOM_011476 ABOM_011476 ABOM_000492 ABOM_000492 ABOM_000633 ABOM_000633 ABOM_001801 ABOM_001801 ABOM_002472 ABOM_002472 ABOM_005726 ABOM_005726 ABOM_005177 ABOM_005177 ABOM_005359 ABOM_005359 ABOM_005459 ABOM_005459 ABOM_006977 ABOM_006977 ABOM_007658 ABOM_007658 ABOM_007828 ABOM_007828
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_007503HNRNP arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (352 aa)
ABOM_007487SWI-SNF complex subunit (BAF60b). (472 aa)
ABOM_009352Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (861 aa)
ABOM_009682RSC complex subunit Sfh1. (565 aa)
ABOM_010081Uncharacterized protein. (563 aa)
ABOM_010866Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (298 aa)
ABOM_011427Uncharacterized protein. (201 aa)
ABOM_010837SWI-SNF complex subunit (Snf5). (804 aa)
ABOM_011020Histone H2A; Belongs to the histone H2A family. (133 aa)
ABOM_011476Uncharacterized protein. (290 aa)
ABOM_000492Glycosidase crf1. (341 aa)
ABOM_000633Component of the RSC chromatin remodeling complex. (680 aa)
ABOM_001801Transglycosidase. (367 aa)
ABOM_002472Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
ABOM_005726Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
ABOM_005177RSC complex subunit (RSC1). (886 aa)
ABOM_005359Actin-related protein 4; Belongs to the actin family. (472 aa)
ABOM_005459Glycosidase; Belongs to the glycosyl hydrolase 16 family. (382 aa)
ABOM_006977Chromatin structure-remodeling complex subunit snf2. (1446 aa)
ABOM_007658S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (543 aa)
ABOM_007828Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (85 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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