STRINGSTRING
ABOM_012206 ABOM_012206 RPS1 RPS1 ABOM_012244 ABOM_012244 ABOM_011962 ABOM_011962 ABOM_012171 ABOM_012171 ABOM_011499 ABOM_011499 ABOM_012055 ABOM_012055 ABOM_011383 ABOM_011383 ABOM_011382 ABOM_011382 ABOM_011433 ABOM_011433 ABOM_011307 ABOM_011307 ABOM_011114 ABOM_011114 RPS0 RPS0 ABOM_011051 ABOM_011051 ABOM_010658 ABOM_010658 ABOM_011004 ABOM_011004 ABOM_010866 ABOM_010866 ABOM_010742 ABOM_010742 ABOM_010746 ABOM_010746 ABOM_011052 ABOM_011052 ABOM_010016 ABOM_010016 ABOM_010188 ABOM_010188 ABOM_010207 ABOM_010207 ABOM_010905 ABOM_010905 ABOM_010911 ABOM_010911 ABOM_009536 ABOM_009536 ABOM_010124 ABOM_010124 ABOM_009769 ABOM_009769 ABOM_009787 ABOM_009787 ABOM_010688 ABOM_010688 ABOM_010259 ABOM_010259 SPB1 SPB1 ABOM_010370 ABOM_010370 ABOM_008750 ABOM_008750 ABOM_009895 ABOM_009895 ABOM_010258 ABOM_010258 ABOM_008909 ABOM_008909 ABOM_009671 ABOM_009671 ABOM_008597 ABOM_008597 ABOM_009532 ABOM_009532 ABOM_009704 ABOM_009704 ABOM_009089 ABOM_009089 ABOM_009361 ABOM_009361 ABOM_009579 ABOM_009579 ABOM_008169 ABOM_008169 ABOM_007544 ABOM_007544 ABOM_007489 ABOM_007489 ABOM_009294 ABOM_009294 ABOM_008217 ABOM_008217 ABOM_008887 ABOM_008887 ABOM_008121 ABOM_008121 ABOM_008115 ABOM_008115 ABOM_007500 ABOM_007500 ABOM_007835 ABOM_007835 ABOM_008522 ABOM_008522 ABOM_006843 ABOM_006843 ERB1 ERB1 ABOM_008825 ABOM_008825 ABOM_006870 ABOM_006870 ABOM_007176 ABOM_007176 ABOM_008798 ABOM_008798 ABOM_007028 ABOM_007028 ABOM_007576 ABOM_007576 ABOM_007201 ABOM_007201 ABOM_007055 ABOM_007055 ABOM_006956 ABOM_006956 ABOM_006974 ABOM_006974 ABOM_006596 ABOM_006596 ABOM_006570 ABOM_006570 ABOM_006604 ABOM_006604 ABOM_007460 ABOM_007460 ABOM_007481 ABOM_007481 ABOM_006181 ABOM_006181 ABOM_006088 ABOM_006088 ABOM_006101 ABOM_006101 ABOM_006171 ABOM_006171 ABOM_007085 ABOM_007085 ABOM_005365 ABOM_005365 ABOM_005537 ABOM_005537 ABOM_005253 ABOM_005253 ABOM_005203 ABOM_005203 ABOM_006293 ABOM_006293 ABOM_005170 ABOM_005170 ABOM_005218 ABOM_005218 ABOM_005520 ABOM_005520 ABOM_005342 ABOM_005342 ABOM_004776 ABOM_004776 ABOM_005675 ABOM_005675 ABOM_004768 ABOM_004768 ABOM_004746 ABOM_004746 ABOM_005304 ABOM_005304 ABOM_005344 ABOM_005344 ABOM_005114 ABOM_005114 ABOM_005136 ABOM_005136 ABOM_004749 ABOM_004749 ABOM_004735 ABOM_004735 ABOM_005157 ABOM_005157 ABOM_003730 ABOM_003730 NOP7 NOP7 YTM1 YTM1 ABOM_005024 ABOM_005024 ABOM_003733 ABOM_003733 ABOM_004214 ABOM_004214 ABOM_003841 ABOM_003841 ABOM_004161 ABOM_004161 cnxG cnxG ABOM_004184 ABOM_004184 ABOM_002806 ABOM_002806 ABOM_002395 ABOM_002395 ABOM_002047 ABOM_002047 ABOM_003460 ABOM_003460 ABOM_002984 ABOM_002984 ABOM_003049 ABOM_003049 ABOM_002269 ABOM_002269 ABOM_002263 ABOM_002263 ABOM_001663 ABOM_001663 ABOM_001304 ABOM_001304 ABOM_001376 ABOM_001376 ABOM_001392 ABOM_001392 ABOM_001199 ABOM_001199 ABOM_001226 ABOM_001226 ABOM_000875 ABOM_000875 ABOM_001000 ABOM_001000 ABOM_001129 ABOM_001129 ABOM_000456 ABOM_000456 ABOM_000479 ABOM_000479 ABOM_000763 ABOM_000763 ABOM_000318 ABOM_000318 ABOM_000248 ABOM_000248
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_012206Uncharacterized protein. (315 aa)
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
ABOM_012244WD domain protein. (931 aa)
ABOM_01196260S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (185 aa)
ABOM_012171Uncharacterized protein. (92 aa)
ABOM_011499rRNA methyltransferase NOP1. (317 aa)
ABOM_012055ATP-dependent RNA helicase dbp8; Belongs to the DEAD box helicase family. (523 aa)
ABOM_011383Putative ATP dependent RNA helicase (Dob1). (1080 aa)
ABOM_011382Nuclear envelope protein Cut8; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (312 aa)
ABOM_011433Sentrin/sumo-specific protease. (1037 aa)
ABOM_011307Nucleolar protein nop5. (578 aa)
ABOM_011114Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (153 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (299 aa)
ABOM_011051Uncharacterized protein. (391 aa)
ABOM_010658Small nucleolar ribonucleoprotein complex subunit Utp15. (541 aa)
ABOM_011004Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (160 aa)
ABOM_010866Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (298 aa)
ABOM_010742Methyltransferase BUD23. (245 aa)
ABOM_010746Pre-rRNA-processing protein pno1. (258 aa)
ABOM_011052Cell morphogenesis protein Las1. (394 aa)
ABOM_010016Putative ribonuclease P complex subunit Pop2. (311 aa)
ABOM_010188Putative small nucleolar ribonucleoprotein complex component (Utp5). (847 aa)
ABOM_01020740S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (237 aa)
ABOM_010905Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
ABOM_010911Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (143 aa)
ABOM_009536Ribosomal_S10 domain-containing protein. (134 aa)
ABOM_010124KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (362 aa)
ABOM_009769rRNA processing protein Bystin. (496 aa)
ABOM_009787SnoRNA binding protein. (1015 aa)
ABOM_010688Putative rRNA maturation protein (Nop14). (885 aa)
ABOM_010259U3 small nucleolar RNA-associated protein 7. (535 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (806 aa)
ABOM_010370rRNA biogenesis protein RRP5. (1832 aa)
ABOM_008750Ribosomal_L28e domain-containing protein. (157 aa)
ABOM_009895Putative pectate lyase. (234 aa)
ABOM_010258Pre-rRNA processing protein Tsr1. (794 aa)
ABOM_008909Putative rRNA processing protein (Ebp2). (374 aa)
ABOM_009671Ribosome biogenesis (Nop4). (728 aa)
ABOM_008597Uncharacterized protein. (501 aa)
ABOM_009532Pre-rRNA-processing protein IPI1. (346 aa)
ABOM_009704U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (697 aa)
ABOM_00908940S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
ABOM_009361Uncharacterized protein. (190 aa)
ABOM_009579Putative RNA 3'-terminal phosphate cyclase. (512 aa)
ABOM_008169Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (155 aa)
ABOM_00754440S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (149 aa)
ABOM_007489Small nucleolar ribonucleoprotein complex subunit (SOF1). (429 aa)
ABOM_009294TeaA receptor TeaR. (522 aa)
ABOM_008217Exosome complex endonuclease 1. (269 aa)
ABOM_008887Casein kinase I hhp1; Belongs to the protein kinase superfamily. (403 aa)
ABOM_00812140S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
ABOM_008115RRP7 superfamily domain-containing protein. (310 aa)
ABOM_007500ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (472 aa)
ABOM_007835Serine/threonine-protein kinase rio2. (403 aa)
ABOM_008522Putative small nucleolar ribonucleoprotein complex subunit. (952 aa)
ABOM_006843Mitochondrial 37S ribosomal protein MRPS8. (170 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (784 aa)
ABOM_008825Exosome component 3'-5' exonuclease. (766 aa)
ABOM_006870U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (726 aa)
ABOM_00717620S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (443 aa)
ABOM_008798Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (214 aa)
ABOM_007028Ribosomal protein S23 (S12); Belongs to the universal ribosomal protein uS12 family. (145 aa)
ABOM_007576U3 small nucleolar ribonucleoprotein Lcp5. (384 aa)
ABOM_007201Sas10/Utp3 family protein. (648 aa)
ABOM_007055Mitochondrial 37S ribosomal protein NAM9. (456 aa)
ABOM_006956Low-temperature viability protein ltv1. (486 aa)
ABOM_006974Ribosomal_L2_C domain-containing protein. (254 aa)
ABOM_006596Uncharacterized protein. (148 aa)
ABOM_006570Protein phosphatase; Belongs to the universal ribosomal protein uS3 family. (266 aa)
ABOM_006604Uncharacterized protein. (385 aa)
ABOM_007460Exosome complex exonuclease Rrp40. (272 aa)
ABOM_007481Protein grc3. (831 aa)
ABOM_006181Periodic tryptophan protein 2. (900 aa)
ABOM_006088RNase_PH domain-containing protein. (385 aa)
ABOM_006101Ribosome biogenesis protein BMS1. (1171 aa)
ABOM_006171Ulp1 protease family protein. (1226 aa)
ABOM_007085Putative U3 small nucleolar ribonucleoprotein subunit (Imp3). (188 aa)
ABOM_005365Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
ABOM_005537rRNA processing protein Utp6. (395 aa)
ABOM_005253Exosome-associated protein. (255 aa)
ABOM_005203Exosome complex component rrp4. (390 aa)
ABOM_006293Protein required for cell viability Rrp17. (216 aa)
ABOM_005170U3 small nucleolar RNA-associated protein 22. (1110 aa)
ABOM_005218RNA processing protein Emg1. (262 aa)
ABOM_005520Nucleolar protein 56. (522 aa)
ABOM_005342Small nucleolar ribonucleoprotein complex subunit. (611 aa)
ABOM_004776Ribosomal assembly complex component Ipi3. (581 aa)
ABOM_005675Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (566 aa)
ABOM_00476840S ribosomal protein S27. (82 aa)
ABOM_004746MYB DNA-binding domain protein. (636 aa)
ABOM_005304Exonuclease domain-containing protein. (753 aa)
ABOM_005344Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
ABOM_005114Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
ABOM_005136Putative 40s ribosomal protein s28 protein. (68 aa)
ABOM_00474940S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
ABOM_004735S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (193 aa)
ABOM_005157ATP-dependent RNA helicase rok1. (727 aa)
ABOM_003730Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (682 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1295 aa)
ABOM_005024Uncharacterized protein. (414 aa)
ABOM_003733rRNA processing protein RRP9. (621 aa)
ABOM_004214GTP-binding protein. (545 aa)
ABOM_003841Exosome complex subunit Rrp46. (249 aa)
ABOM_004161Ribosomal RNA processing protein. (313 aa)
cnxGMolybdopterin synthase sulfur carrier subunit; Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by UBA4. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin. (106 aa)
ABOM_004184Uncharacterized protein. (1673 aa)
ABOM_002806Exosome complex endonuclease 2/ribosomal RNA processing protein. (309 aa)
ABOM_002395U3 small nucleolar ribonucleoprotein IMP4. (299 aa)
ABOM_002047Putative williams-beuren syndrome chromosome region. (216 aa)
ABOM_003460RNase_PH domain-containing protein. (413 aa)
ABOM_002984Exosome complex subunit Csl4. (231 aa)
ABOM_003049rRNA-processing protein fcf1. (191 aa)
ABOM_002269Putative small nucleolar ribonucleoprotein complex subunit Utp14. (967 aa)
ABOM_00226340S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (432 aa)
ABOM_001663Putative 40s ribosomal protein s17 protein. (141 aa)
ABOM_001304S10_plectin domain-containing protein. (205 aa)
ABOM_001376U3 small nucleolar RNA-associated protein 10. (1802 aa)
ABOM_001392U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (287 aa)
ABOM_001199DEAH-box RNA helicase (Dhr1). (1147 aa)
ABOM_001226rRNA biogenesis protein rrp36. (349 aa)
ABOM_000875Uncharacterized protein. (496 aa)
ABOM_001000HEAT repeat protein (DRIM). (2614 aa)
ABOM_001129RIX1 domain-containing protein. (776 aa)
ABOM_000456Ribosome biogenesis protein Noc4. (550 aa)
ABOM_000479Uncharacterized protein. (305 aa)
ABOM_000763Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
ABOM_000318RNA-3'-phosphate cyclase family protein. (402 aa)
ABOM_000248Uncharacterized protein. (187 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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