STRINGSTRING
ABOM_000244 ABOM_000244 ABOM_004196 ABOM_004196 ABOM_005386 ABOM_005386 ABOM_008832 ABOM_008832 ABOM_010375 ABOM_010375 ABOM_010686 ABOM_010686 ABOM_011584 ABOM_011584 ABOM_011021 ABOM_011021
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_000244Uncharacterized protein. (455 aa)
ABOM_004196Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (798 aa)
ABOM_005386Origin recognition complex subunit Orc5. (540 aa)
ABOM_008832Origin recognition complex subunit Orc4. (719 aa)
ABOM_010375Importin subunit alpha; Belongs to the importin alpha family. (553 aa)
ABOM_010686Origin recognition complex subunit. (695 aa)
ABOM_011584Origin recognition complex subunit 2. (552 aa)
ABOM_011021Histone H2B; Belongs to the histone H2B family. (141 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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