STRINGSTRING
ABOM_004085 ABOM_004085 ABOM_012152 ABOM_012152 ABOM_012139 ABOM_012139 ABOM_012081 ABOM_012081 UNG1 UNG1 ABOM_012179 ABOM_012179 ABOM_011976 ABOM_011976 ABOM_011743 ABOM_011743 ABOM_011845 ABOM_011845 ABOM_012091 ABOM_012091 ABOM_011423 ABOM_011423 ABOM_011493 ABOM_011493 ABOM_011556 ABOM_011556 ABOM_011295 ABOM_011295 ABOM_010847 ABOM_010847 ABOM_010823 ABOM_010823 ABOM_011311 ABOM_011311 ABOM_010591 ABOM_010591 ABOM_010812 ABOM_010812 ABOM_010798 ABOM_010798 ABOM_010796 ABOM_010796 ABOM_010822 ABOM_010822 ABOM_010998 ABOM_010998 ABOM_011062 ABOM_011062 ABOM_011058 ABOM_011058 ABOM_011064 ABOM_011064 ABOM_010454 ABOM_010454 ABOM_010452 ABOM_010452 ABOM_010456 ABOM_010456 ABOM_010800 ABOM_010800 SLX1 SLX1 ABOM_010505 ABOM_010505 ABOM_010588 ABOM_010588 ABOM_010184 ABOM_010184 ABOM_010938 ABOM_010938 ABOM_010200 ABOM_010200 ABOM_009537 ABOM_009537 ABOM_010021 ABOM_010021 ABOM_009547 ABOM_009547 ABOM_010394 ABOM_010394 ABOM_009538 ABOM_009538 ABOM_010040 ABOM_010040 ABOM_010067 ABOM_010067 ABOM_010274 ABOM_010274 ABOM_010269 ABOM_010269 ABOM_010376 ABOM_010376 ABOM_010352 ABOM_010352 ABOM_010369 ABOM_010369 ABOM_010058 ABOM_010058 ABOM_008769 ABOM_008769 ABOM_009971 ABOM_009971 ABOM_009911 ABOM_009911 ABOM_009464 ABOM_009464 ABOM_009264 ABOM_009264 ABOM_009243 ABOM_009243 ABOM_010092 ABOM_010092 ABOM_010165 ABOM_010165 ABOM_009678 ABOM_009678 ABOM_009670 ABOM_009670 ABOM_009470 ABOM_009470 ABOM_008612 ABOM_008612 ABOM_008618 ABOM_008618 ABOM_009349 ABOM_009349 ABOM_010149 ABOM_010149 ABOM_009035 ABOM_009035 ABOM_009117 ABOM_009117 ABOM_009110 ABOM_009110 ABOM_008300 ABOM_008300 ABOM_009358 ABOM_009358 ABOM_008292 ABOM_008292 ABOM_008959 ABOM_008959 ABOM_008157 ABOM_008157 ABOM_008278 ABOM_008278 ABOM_009021 ABOM_009021 ABOM_009420 ABOM_009420 ABOM_009429 ABOM_009429 ABOM_008466 ABOM_008466 ABOM_008501 ABOM_008501 ABOM_008475 ABOM_008475 ABOM_008998 ABOM_008998 ABOM_009276 ABOM_009276 ABOM_008847 ABOM_008847 ABOM_008231 ABOM_008231 ABOM_008671 ABOM_008671 ABOM_008500 ABOM_008500 ABOM_007681 ABOM_007681 ABOM_007838 ABOM_007838 ABOM_007818 ABOM_007818 ABOM_007823 ABOM_007823 ABOM_007807 ABOM_007807 ABOM_007828 ABOM_007828 ABOM_008074 ABOM_008074 ABOM_007824 ABOM_007824 ABOM_008843 ABOM_008843 ABOM_008558 ABOM_008558 ABOM_007810 ABOM_007810 ABOM_008828 ABOM_008828 ABOM_006908 ABOM_006908 ABOM_008677 ABOM_008677 ABOM_007142 ABOM_007142 ABOM_007574 ABOM_007574 ABOM_008556 ABOM_008556 ABOM_007062 ABOM_007062 ABOM_005964 ABOM_005964 ABOM_005917 ABOM_005917 ABOM_007780 ABOM_007780 ABOM_006985 ABOM_006985 ABOM_006613 ABOM_006613 ABOM_006595 ABOM_006595 ABOM_006562 ABOM_006562 ABOM_007449 ABOM_007449 ABOM_007268 ABOM_007268 ABOM_006834 ABOM_006834 ABOM_006825 ABOM_006825 ABOM_006116 ABOM_006116 ABOM_006930 ABOM_006930 ABOM_007105 ABOM_007105 ABOM_006549 ABOM_006549 ABOM_005780 ABOM_005780 ABOM_005907 ABOM_005907 ABOM_005849 ABOM_005849 ABOM_006158 ABOM_006158 ABOM_006166 ABOM_006166 ABOM_006435 ABOM_006435 ABOM_006347 ABOM_006347 ABOM_006345 ABOM_006345 ABOM_006235 ABOM_006235 ABOM_006247 ABOM_006247 ABOM_006268 ABOM_006268 ABOM_006224 ABOM_006224 ABOM_006262 ABOM_006262 ABOM_006288 ABOM_006288 ABOM_005994 ABOM_005994 ABOM_006537 ABOM_006537 ABOM_006012 ABOM_006012 ABOM_005255 ABOM_005255 ABOM_006236 ABOM_006236 ABOM_005234 ABOM_005234 ABOM_005662 ABOM_005662 ABOM_005732 ABOM_005732 ABOM_012238 ABOM_012238 ABOM_004861 ABOM_004861 ABOM_006018 ABOM_006018 ABOM_005302 ABOM_005302 ABOM_005315 ABOM_005315 ABOM_005232 ABOM_005232 ABOM_004762 ABOM_004762 ABOM_004754 ABOM_004754 ABOM_004551 ABOM_004551 ABOM_004656 ABOM_004656 ABOM_004806 ABOM_004806 ABOM_005009 ABOM_005009 ABOM_004559 ABOM_004559 ABOM_005050 ABOM_005050 ABOM_004400 ABOM_004400 ABOM_004480 ABOM_004480 ABOM_004489 ABOM_004489 ABOM_004432 ABOM_004432 ABOM_004591 ABOM_004591 ABOM_004491 ABOM_004491 NTH1 NTH1 ABOM_003910 ABOM_003910 ABOM_004458 ABOM_004458 ABOM_003883 ABOM_003883 ABOM_003768 ABOM_003768 ABOM_003644 ABOM_003644 ABOM_002655 ABOM_002655 ABOM_004230 ABOM_004230 ABOM_004278 ABOM_004278 ABOM_004366 ABOM_004366 ABOM_004221 ABOM_004221 ABOM_002802 ABOM_002802 ABOM_002822 ABOM_002822 ABOM_003491 ABOM_003491 ABOM_002390 ABOM_002390 ABOM_002482 ABOM_002482 ABOM_002513 ABOM_002513 ABOM_003002 ABOM_003002 ABOM_002396 ABOM_002396 ABOM_002981 ABOM_002981 ABOM_002514 ABOM_002514 ABOM_002967 ABOM_002967 ABOM_003178 ABOM_003178 ABOM_003124 ABOM_003124 ABOM_002233 ABOM_002233 ABOM_003001 ABOM_003001 ABOM_002355 ABOM_002355 ABOM_004098 ABOM_004098 ABOM_002251 ABOM_002251 ABOM_004152 ABOM_004152 ABOM_004128 ABOM_004128 ABOM_004054 ABOM_004054 ABOM_003612 ABOM_003612 ABOM_004131 ABOM_004131 ABOM_003554 ABOM_003554 ABOM_001568 ABOM_001568 ABOM_001347 ABOM_001347 ABOM_001373 ABOM_001373 ABOM_001375 ABOM_001375 ABOM_001358 ABOM_001358 ABOM_001273 ABOM_001273 ABOM_001402 ABOM_001402 ABOM_001201 ABOM_001201 ABOM_000832 ABOM_000832 ABOM_001270 ABOM_001270 ABOM_000780 ABOM_000780 ABOM_000859 ABOM_000859 ABOM_001092 ABOM_001092 ABOM_000765 ABOM_000765 ABOM_000969 ABOM_000969 ABOM_000443 ABOM_000443 ABOM_000916 ABOM_000916 ABOM_000463 ABOM_000463 ABOM_000096 ABOM_000096 ABOM_000487 ABOM_000487 ABOM_000611 ABOM_000611 ABOM_000596 ABOM_000596 ABOM_000762 ABOM_000762 ABOM_000235 ABOM_000235 ABOM_000109 ABOM_000109 ABOM_000199 ABOM_000199 ABOM_011843 ABOM_011843 ABOM_011730 ABOM_011730 ABOM_011732 ABOM_011732 ABOM_011649 ABOM_011649 ABOM_012243 ABOM_012243 ABOM_011996 ABOM_011996 ABOM_011021 ABOM_011021 ABOM_011155 ABOM_011155 ABOM_011376 ABOM_011376 ABOM_011536 ABOM_011536
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_004085UV-damaged DNA binding protein. (1146 aa)
ABOM_012152DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (523 aa)
ABOM_012139Chromo domain-containing protein. (585 aa)
ABOM_012081Fungal specific transcription factor. (399 aa)
UNG1Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (372 aa)
ABOM_012179Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (606 aa)
ABOM_011976RNA polymerase II transcription factor subunit 1. (683 aa)
ABOM_011743Exonuclease. (731 aa)
ABOM_011845C6 finger domain protein Acr-2. (587 aa)
ABOM_012091Uncharacterized protein. (302 aa)
ABOM_011423RNA polymerase II transcription factor B subunit 3. (378 aa)
ABOM_011493Putative ubiquitin C-terminal hydrolase; Belongs to the peptidase C19 family. (1307 aa)
ABOM_011556DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1204 aa)
ABOM_011295Rad2-like endonuclease. (880 aa)
ABOM_010847COP9 signalosome complex subunit 8. (216 aa)
ABOM_010823Uncharacterized protein. (450 aa)
ABOM_011311Uncharacterized protein. (381 aa)
ABOM_010591Uncharacterized protein. (301 aa)
ABOM_010812Ubiquitin fusion degradation protein (Ufd1). (798 aa)
ABOM_010798Phosphatidylinositol 3-and 4-kinase; Belongs to the PI3/PI4-kinase family. (2462 aa)
ABOM_010796AAA family ATPase. (753 aa)
ABOM_010822Postreplication repair E3 ubiquitin-protein ligase rad18. (407 aa)
ABOM_010998Single-stranded DNA endonuclease. (1135 aa)
ABOM_011062Putative ubiquitin ligase subunit CulD; Belongs to the cullin family. (894 aa)
ABOM_011058SsDNA binding protein Ssb3. (163 aa)
ABOM_011064Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (2880 aa)
ABOM_010454RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (509 aa)
ABOM_010452Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1415 aa)
ABOM_010456Topoisomerase 1-associated factor 1. (1105 aa)
ABOM_010800Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (283 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (402 aa)
ABOM_010505Uncharacterized protein. (293 aa)
ABOM_010588DNA mismatch repair protein (Pms1). (1067 aa)
ABOM_010184AKAP7_NLS domain-containing protein. (367 aa)
ABOM_010938WD repeat protein. (397 aa)
ABOM_010200RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (457 aa)
ABOM_009537CUE domain protein. (539 aa)
ABOM_010021COP9 signalosome complex subunit 1. (492 aa)
ABOM_009547Peptidyl-prolyl cis-trans isomerase D. (373 aa)
ABOM_010394Cyclin-like protein (Clg1). (469 aa)
ABOM_009538CUE domain protein. (133 aa)
ABOM_010040Cell wall protein. (284 aa)
ABOM_010067Ubiquitin-40S ribosomal protein S31 fusion protein. (217 aa)
ABOM_010274DNA-directed RNA polymerase II subunit RPB3. (339 aa)
ABOM_010269Peptidyl prolyl cis-trans isomerase Cyclophilin. (174 aa)
ABOM_010376Telomere-binding alpha subunit central domain protein. (604 aa)
ABOM_010352Mitotic spindle checkpoint protein (Mad2B). (294 aa)
ABOM_010369WD domain protein. (714 aa)
ABOM_010058DNA ligase. (877 aa)
ABOM_008769Replication factor C subunit 4. (352 aa)
ABOM_009971RNA polymerase II transcription factor B subunit 5. (73 aa)
ABOM_009911Uncharacterized protein. (203 aa)
ABOM_009464UDP-galactopyranose mutase. (538 aa)
ABOM_009264Arabinogalactan endo-beta-1,4-galactanase. (347 aa)
ABOM_009243Polynucleotide kinase-3'-phosphatase. (365 aa)
ABOM_010092Putative sister chromatid cohesion protein (Eso1). (673 aa)
ABOM_010165Cyclin-dependent protein kinase complex component. (270 aa)
ABOM_009678BZIP domain-containing protein. (282 aa)
ABOM_009670Mating-type switch/DNA repair protein Swi10/Rad10. (342 aa)
ABOM_009470Putative DNA repair protein Mus81. (582 aa)
ABOM_008612DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
ABOM_008618Putative nucleosome remodeling complex ATPase subunit (Snf2h). (932 aa)
ABOM_009349Transcription factor TFIIH complex subunit. (376 aa)
ABOM_010149BRCT domain-containing protein. (271 aa)
ABOM_009035DNA-directed polymerase kappa. (620 aa)
ABOM_009117Putative nuclear transport factor NTF-2. (118 aa)
ABOM_009110Protein serine/threonine kinase (Ran1); Belongs to the protein kinase superfamily. (427 aa)
ABOM_008300UV excision repair protein rhp23. (377 aa)
ABOM_009358Uncharacterized protein. (555 aa)
ABOM_008292Serine/threonine-protein kinase hal4. (516 aa)
ABOM_008959Cell division control protein Cdc31. (257 aa)
ABOM_008157Uncharacterized protein. (317 aa)
ABOM_008278E3 ubiquitin-protein ligase RBX1. (120 aa)
ABOM_009021AAA family ATPase. (629 aa)
ABOM_009420Serine/threonine-protein kinase chk2 (Cds1). (648 aa)
ABOM_009429Putative DNA-directed RNA polymerase II subunit RPB11a. (125 aa)
ABOM_008466DNA-directed RNA polymerases I. (159 aa)
ABOM_008501Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (297 aa)
ABOM_008475Cytosine deaminase. (148 aa)
ABOM_008998EthD domain-containing protein. (173 aa)
ABOM_009276G1/S-specific cyclin Pcl5. (714 aa)
ABOM_008847Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (1255 aa)
ABOM_008231Putative serine/threonine protein kinase; Belongs to the protein kinase superfamily. (337 aa)
ABOM_008671AAA domain-containing protein. (1104 aa)
ABOM_008500Proliferating cell nuclear antigen. (618 aa)
ABOM_007681DNA mismatch repair protein Msh1. (965 aa)
ABOM_007838DNA mismatch repair protein Mlh1. (738 aa)
ABOM_007818Pre-mRNA-splicing factor syf1. (849 aa)
ABOM_007823Protein kinase. (822 aa)
ABOM_007807DNA ligase. (985 aa)
ABOM_007828Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (85 aa)
ABOM_008074Uncharacterized protein. (235 aa)
ABOM_007824WD repeat protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (1344 aa)
ABOM_008843Tyrosyl-DNA phosphodiesterase. (560 aa)
ABOM_008558Polymerase (RNA) II (DNA directed) polypeptide D. (148 aa)
ABOM_007810Serine/threonine-protein phosphatase. (433 aa)
ABOM_008828DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR). (940 aa)
ABOM_006908Putative CHY and RING finger domain protein. (746 aa)
ABOM_008677Uncharacterized protein. (960 aa)
ABOM_007142TFIIH basal transcription factor complex p47 subunit. (216 aa)
ABOM_007574Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
ABOM_008556Uncharacterized protein. (307 aa)
ABOM_007062Cyclin-dependent protein kinase regulator Pho80. (388 aa)
ABOM_005964Replication factor C subunit 2. (391 aa)
ABOM_005917RecQ-mediated genome instability protein. (243 aa)
ABOM_007780DNA repair protein Rhp26/Rad26. (1197 aa)
ABOM_006985DNA helicase ino80. (1692 aa)
ABOM_006613BRCT domain protein. (852 aa)
ABOM_006595Uncharacterized protein. (142 aa)
ABOM_006562Uncharacterized protein. (686 aa)
ABOM_007449Cytoplasm to vacuole targeting Vps64. (750 aa)
ABOM_007268Mucin. (600 aa)
ABOM_006834Uncharacterized protein. (214 aa)
ABOM_006825DNA repair and recombination protein radC. (890 aa)
ABOM_006116Endonuclease/exonuclease/phosphatase family protein. (369 aa)
ABOM_006930Uncharacterized protein. (267 aa)
ABOM_007105DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
ABOM_006549Uncharacterized protein. (347 aa)
ABOM_005780MGMT family protein. (136 aa)
ABOM_005907DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1155 aa)
ABOM_005849Putative PHD finger domain protein. (911 aa)
ABOM_006158Putative TFIIH complex helicase Ssl2. (812 aa)
ABOM_006166Ubiquitin hydrolase; Belongs to the peptidase C19 family. (1039 aa)
ABOM_006435Rad51 family DNA repair protein. (452 aa)
ABOM_006347Replication factor C subunit 1. (1081 aa)
ABOM_006345Replication factor C subunit 5. (352 aa)
ABOM_006235Uncharacterized protein. (225 aa)
ABOM_006247Cyclin-dependent protein kinase complex component (Pcl7). (497 aa)
ABOM_006268DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1111 aa)
ABOM_006224Fe2OG dioxygenase domain-containing protein. (229 aa)
ABOM_006262Putative serine/threonine protein kinase. (349 aa)
ABOM_006288Putative 3-5 exonuclease. (435 aa)
ABOM_005994Zinc finger protein. (122 aa)
ABOM_006537DNA-directed DNA polymerase theta. (924 aa)
ABOM_006012Helicase mug81. (2010 aa)
ABOM_005255UBX domain protein. (377 aa)
ABOM_006236Uncharacterized protein. (597 aa)
ABOM_005234Putative DNA lyase. (627 aa)
ABOM_005662Uncharacterized protein. (392 aa)
ABOM_005732Uncharacterized protein. (344 aa)
ABOM_012238AAA domain-containing protein. (266 aa)
ABOM_004861Uncharacterized protein. (395 aa)
ABOM_006018COP9 signalosome complex subunit 5. (334 aa)
ABOM_005302Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (506 aa)
ABOM_005315Asparaginyl-tRNA synthetase. (571 aa)
ABOM_005232Uncharacterized protein. (238 aa)
ABOM_004762COP9 signalosome complex subunit 2. (506 aa)
ABOM_004754DNA polymerase. (1707 aa)
ABOM_004551Replication factor C subunit 3. (399 aa)
ABOM_004656Uncharacterized protein. (346 aa)
ABOM_004806Transcription elongation factor S-II. (304 aa)
ABOM_005009Endonuclease/exonuclease/phosphatase family protein. (339 aa)
ABOM_004559DNA repair protein Rad14. (344 aa)
ABOM_005050DNA repair protein (Rad57). (570 aa)
ABOM_004400ISWI chromatin-remodeling complex ATPase ISW2. (1122 aa)
ABOM_004480Ubiquitin carboxyl-terminal hydrolase. (717 aa)
ABOM_004489COP9 signalosome complex subunit 7. (322 aa)
ABOM_004432TPR domain protein. (450 aa)
ABOM_004591Uncharacterized protein. (372 aa)
ABOM_004491Uncharacterized protein. (382 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (418 aa)
ABOM_003910Uncharacterized protein. (455 aa)
ABOM_004458DNA repair protein Rad50. (1353 aa)
ABOM_003883Uncharacterized protein. (541 aa)
ABOM_003768FHA domain protein. (688 aa)
ABOM_003644DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1202 aa)
ABOM_002655CIA30 family protein. (230 aa)
ABOM_004230DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (348 aa)
ABOM_004278Protein kinase. (1002 aa)
ABOM_004366Uncharacterized protein. (1388 aa)
ABOM_004221DNA polymerase POL4. (716 aa)
ABOM_002802Terminal deoxynucleotidyl transferase. (971 aa)
ABOM_002822DNA ligase. (881 aa)
ABOM_003491DNA repair protein RAD1. (977 aa)
ABOM_002390SNF2 family helicase/ATPase PasG. (858 aa)
ABOM_002482TFIIH complex helicase Rad3. (794 aa)
ABOM_002513Putative integral membrane protein. (547 aa)
ABOM_003002FHA domain protein. (582 aa)
ABOM_002396BRCT domain protein. (260 aa)
ABOM_002981Putative cell cycle control protein (Cwf8). (851 aa)
ABOM_002514DNA-directed RNA polymerases I. (214 aa)
ABOM_002967Subunit of DNA polymerase II. (800 aa)
ABOM_003178Uncharacterized protein. (288 aa)
ABOM_003124Uncharacterized protein. (907 aa)
ABOM_002233DNA repair protein. (782 aa)
ABOM_003001UPF0187 domain protein. (387 aa)
ABOM_002355DNA-directed RNA polymerases I. (73 aa)
ABOM_004098Putative replication factor-a protein. (276 aa)
ABOM_002251Cyclin (Pcl1). (424 aa)
ABOM_004152Uncharacterized protein. (373 aa)
ABOM_004128Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (786 aa)
ABOM_004054K+ channel tetramerization domain containing protein. (435 aa)
ABOM_003612C6 transcription factor (Acr-2). (500 aa)
ABOM_004131Uncharacterized protein. (174 aa)
ABOM_003554Uncharacterized protein. (146 aa)
ABOM_001568Uncharacterized protein. (334 aa)
ABOM_001347Uncharacterized protein. (1081 aa)
ABOM_001373Putative mismatch-specific thymine-DNA glycosylase. (475 aa)
ABOM_001375Uncharacterized protein. (1134 aa)
ABOM_001358Putative serine/threonine protein kinase. (533 aa)
ABOM_001273EthD domain-containing protein. (163 aa)
ABOM_001402DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1748 aa)
ABOM_001201Putative tyrosyl-DNA phosphodiesterase. (680 aa)
ABOM_000832RecQ family helicase MusN. (1523 aa)
ABOM_001270Poly [ADP-ribose] polymerase. (640 aa)
ABOM_000780Zn(2)-C6 fungal-type domain-containing protein. (497 aa)
ABOM_000859Ubiquitin hydrolase. (1101 aa)
ABOM_001092COP9 signalosome complex subunit 6. (378 aa)
ABOM_000765Putative DNA N-glycosylase. (434 aa)
ABOM_000969Telomere silencing protein Zds1. (968 aa)
ABOM_000443Uncharacterized protein. (764 aa)
ABOM_000916CHY zinc finger domain protein. (693 aa)
ABOM_000463COP9 signalosome complex subunit 4. (415 aa)
ABOM_000096Uncharacterized protein. (773 aa)
ABOM_000487DNA mismatch repair protein. (893 aa)
ABOM_000611Putative AAA family ATPase. (1004 aa)
ABOM_000596RECA_2 domain-containing protein. (375 aa)
ABOM_000762Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (808 aa)
ABOM_000235DNA polymerase delta subunit 4. (191 aa)
ABOM_000109Putative cytosine deaminase. (162 aa)
ABOM_000199Ubiquitin C-terminal hydrolase; Belongs to the peptidase C19 family. (1406 aa)
ABOM_011843COP9 signalosome complex subunit 3. (492 aa)
ABOM_011730Chromatin-remodeling complex subunit ies6. (188 aa)
ABOM_011732Actin-like protein arp5; Belongs to the actin family. (755 aa)
ABOM_011649Ubiquitin carboxyl-terminal hydrolase. (868 aa)
ABOM_012243ATPase_AAA_core domain-containing protein. (225 aa)
ABOM_011996Serine/threonine-protein phosphatase. (320 aa)
ABOM_011021Histone H2B; Belongs to the histone H2B family. (141 aa)
ABOM_011155DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (629 aa)
ABOM_011376ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (539 aa)
ABOM_011536CBF/NF-Y family transcription factor. (195 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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