7 items (Aspergillus bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_005357	DUF907 domain protein. (703 aa)
	ABOM_000683	TRP_N domain-containing protein. (730 aa)
	ABOM_001782	TRP_N domain-containing protein. (635 aa)
	ABOM_004254	DUF907 domain protein. (668 aa)
	ABOM_004410	DUF907 domain protein. (737 aa)
	ABOM_004877	TRP domain-containing protein. (1003 aa)
	ABOM_009874	Integral membrane protein. (1131 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_000683	ABOM_009874	A0A1F8AG25	A0A1F7ZRK7	TRP_N domain-containing protein.	Integral membrane protein.	0.426
ABOM_001782	ABOM_009874	A0A1F8AE96	A0A1F7ZRK7	TRP_N domain-containing protein.	Integral membrane protein.	0.426
ABOM_004254	ABOM_009874	A0A1F8A743	A0A1F7ZRK7	DUF907 domain protein.	Integral membrane protein.	0.426
ABOM_004410	ABOM_009874	A0A1F8A5H2	A0A1F7ZRK7	DUF907 domain protein.	Integral membrane protein.	0.426
ABOM_004877	ABOM_009874	A0A1F8A494	A0A1F7ZRK7	TRP domain-containing protein.	Integral membrane protein.	0.411
ABOM_009874	ABOM_000683	A0A1F7ZRK7	A0A1F8AG25	Integral membrane protein.	TRP_N domain-containing protein.	0.426
ABOM_009874	ABOM_001782	A0A1F7ZRK7	A0A1F8AE96	Integral membrane protein.	TRP_N domain-containing protein.	0.426
ABOM_009874	ABOM_004254	A0A1F7ZRK7	A0A1F8A743	Integral membrane protein.	DUF907 domain protein.	0.426
ABOM_009874	ABOM_004410	A0A1F7ZRK7	A0A1F8A5H2	Integral membrane protein.	DUF907 domain protein.	0.426
ABOM_009874	ABOM_004877	A0A1F7ZRK7	A0A1F8A494	Integral membrane protein.	TRP domain-containing protein.	0.411