(8 nodes) Ubiquitin homologues network (Aspergillus bombycis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABOM_002293	Ubiquitin-60S ribosomal protein L40 fusion protein. (156 aa)
	ABOM_001380	Ubiquitin-like protein DskB. (470 aa)
	ABOM_010067	Ubiquitin-40S ribosomal protein S31 fusion protein. (217 aa)
	ABOM_008300	UV excision repair protein rhp23. (377 aa)
	ABOM_004159	Ubiquitin domain protein. (291 aa)
	ABOM_004180	Ubiquitin-like protein SMT3. (110 aa)
	ABOM_003480	Ubiquitin carboxyl-terminal hydrolase. (571 aa)
	ABOM_011304	Ubiquitin-like protein (HubA). (195 aa)

Your Current Organism:

Aspergillus bombycis

NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABOM_001380	ABOM_002293	A0A1F8AE47	A0A1F8ABJ8	Ubiquitin-like protein DskB.	Ubiquitin-60S ribosomal protein L40 fusion protein.	0.918
ABOM_001380	ABOM_003480	A0A1F8AE47	A0A1F8A9J3	Ubiquitin-like protein DskB.	Ubiquitin carboxyl-terminal hydrolase.	0.846
ABOM_001380	ABOM_004180	A0A1F8AE47	A0A1F8A888	Ubiquitin-like protein DskB.	Ubiquitin-like protein SMT3.	0.817
ABOM_001380	ABOM_008300	A0A1F8AE47	A0A1F7ZSR8	Ubiquitin-like protein DskB.	UV excision repair protein rhp23.	0.877
ABOM_001380	ABOM_010067	A0A1F8AE47	A0A1F7ZPL7	Ubiquitin-like protein DskB.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.788
ABOM_002293	ABOM_001380	A0A1F8ABJ8	A0A1F8AE47	Ubiquitin-60S ribosomal protein L40 fusion protein.	Ubiquitin-like protein DskB.	0.918
ABOM_002293	ABOM_003480	A0A1F8ABJ8	A0A1F8A9J3	Ubiquitin-60S ribosomal protein L40 fusion protein.	Ubiquitin carboxyl-terminal hydrolase.	0.958
ABOM_002293	ABOM_004180	A0A1F8ABJ8	A0A1F8A888	Ubiquitin-60S ribosomal protein L40 fusion protein.	Ubiquitin-like protein SMT3.	0.847
ABOM_002293	ABOM_008300	A0A1F8ABJ8	A0A1F7ZSR8	Ubiquitin-60S ribosomal protein L40 fusion protein.	UV excision repair protein rhp23.	0.975
ABOM_002293	ABOM_010067	A0A1F8ABJ8	A0A1F7ZPL7	Ubiquitin-60S ribosomal protein L40 fusion protein.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.992
ABOM_003480	ABOM_001380	A0A1F8A9J3	A0A1F8AE47	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like protein DskB.	0.846
ABOM_003480	ABOM_002293	A0A1F8A9J3	A0A1F8ABJ8	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-60S ribosomal protein L40 fusion protein.	0.958
ABOM_003480	ABOM_004180	A0A1F8A9J3	A0A1F8A888	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like protein SMT3.	0.537
ABOM_003480	ABOM_008300	A0A1F8A9J3	A0A1F7ZSR8	Ubiquitin carboxyl-terminal hydrolase.	UV excision repair protein rhp23.	0.897
ABOM_003480	ABOM_010067	A0A1F8A9J3	A0A1F7ZPL7	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.954
ABOM_004180	ABOM_001380	A0A1F8A888	A0A1F8AE47	Ubiquitin-like protein SMT3.	Ubiquitin-like protein DskB.	0.817
ABOM_004180	ABOM_002293	A0A1F8A888	A0A1F8ABJ8	Ubiquitin-like protein SMT3.	Ubiquitin-60S ribosomal protein L40 fusion protein.	0.847
ABOM_004180	ABOM_003480	A0A1F8A888	A0A1F8A9J3	Ubiquitin-like protein SMT3.	Ubiquitin carboxyl-terminal hydrolase.	0.537
ABOM_004180	ABOM_008300	A0A1F8A888	A0A1F7ZSR8	Ubiquitin-like protein SMT3.	UV excision repair protein rhp23.	0.895
ABOM_004180	ABOM_010067	A0A1F8A888	A0A1F7ZPL7	Ubiquitin-like protein SMT3.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.832