STRINGSTRING
ABOM_005354 ABOM_005354 ABOM_011430 ABOM_011430 ABOM_010674 ABOM_010674 ABOM_010046 ABOM_010046 ABOM_010370 ABOM_010370 ABOM_007818 ABOM_007818 ABOM_005537 ABOM_005537 ABOM_004251 ABOM_004251
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_005354mRNA splicing factor (Prp1/Zer1). (938 aa)
ABOM_011430mRNA splicing protein (Prp39). (597 aa)
ABOM_010674Pre-mRNA splicing factor (Prp24). (1290 aa)
ABOM_010046mRNA 3'-end-processing protein rna14. (1014 aa)
ABOM_010370rRNA biogenesis protein RRP5. (1832 aa)
ABOM_007818Pre-mRNA-splicing factor syf1. (849 aa)
ABOM_005537rRNA processing protein Utp6. (395 aa)
ABOM_004251Putative cell cycle control protein (Cwf4). (670 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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