STRINGSTRING
ABOM_000479 ABOM_000479 ABOM_012244 ABOM_012244 ABOM_011888 ABOM_011888 ABOM_011499 ABOM_011499 ABOM_012028 ABOM_012028 ABOM_012017 ABOM_012017 ABOM_011307 ABOM_011307 ABOM_010827 ABOM_010827 ABOM_010796 ABOM_010796 ABOM_011421 ABOM_011421 ABOM_010658 ABOM_010658 ABOM_010016 ABOM_010016 ABOM_010015 ABOM_010015 ABOM_010291 ABOM_010291 ABOM_010188 ABOM_010188 ABOM_010223 ABOM_010223 ABOM_010138 ABOM_010138 ABOM_009787 ABOM_009787 ABOM_009871 ABOM_009871 ABOM_010187 ABOM_010187 ABOM_008911 ABOM_008911 ABOM_009738 ABOM_009738 ABOM_008745 ABOM_008745 ABOM_008766 ABOM_008766 ABOM_009671 ABOM_009671 ABOM_009677 ABOM_009677 ABOM_008616 ABOM_008616 ABOM_009704 ABOM_009704 ABOM_008271 ABOM_008271 TIF6 TIF6 ABOM_008260 ABOM_008260 ABOM_008310 ABOM_008310 ABOM_008167 ABOM_008167 ABOM_007940 ABOM_007940 ABOM_008471 ABOM_008471 ABOM_008887 ABOM_008887 ABOM_008115 ABOM_008115 ABOM_007643 ABOM_007643 ABOM_007835 ABOM_007835 ABOM_008522 ABOM_008522 ABOM_006909 ABOM_006909 ABOM_006888 ABOM_006888 ABOM_007132 ABOM_007132 ABOM_007176 ABOM_007176 ABOM_007175 ABOM_007175 ABOM_007328 ABOM_007328 ABOM_007735 ABOM_007735 ABOM_006957 ABOM_006957 ABOM_006770 ABOM_006770 ABOM_006590 ABOM_006590 ABOM_006604 ABOM_006604 ABOM_007373 ABOM_007373 ABOM_007450 ABOM_007450 ABOM_006181 ABOM_006181 ABOM_006178 ABOM_006178 ABOM_006101 ABOM_006101 ABOM_007085 ABOM_007085 NAT10 NAT10 ABOM_005365 ABOM_005365 ABOM_006355 ABOM_006355 ABOM_005537 ABOM_005537 ABOM_005519 ABOM_005519 ABOM_005170 ABOM_005170 ABOM_005218 ABOM_005218 ABOM_005520 ABOM_005520 ABOM_005342 ABOM_005342 ABOM_005675 ABOM_005675 ABOM_005344 ABOM_005344 ABOM_004569 ABOM_004569 ABOM_003730 ABOM_003730 ABOM_003700 ABOM_003700 ABOM_005024 ABOM_005024 ABOM_002569 ABOM_002569 ABOM_002652 ABOM_002652 ABOM_004214 ABOM_004214 ABOM_004273 ABOM_004273 ABOM_004184 ABOM_004184 ABOM_002096 ABOM_002096 ABOM_003471 ABOM_003471 ABOM_003426 ABOM_003426 ABOM_002395 ABOM_002395 ABOM_002454 ABOM_002454 ABOM_003049 ABOM_003049 ABOM_002983 ABOM_002983 ABOM_002982 ABOM_002982 ABOM_002269 ABOM_002269 ABOM_001376 ABOM_001376 ABOM_001119 ABOM_001119 ABOM_000893 ABOM_000893 ABOM_001370 ABOM_001370 ABOM_001120 ABOM_001120 ABOM_001165 ABOM_001165 ABOM_001099 ABOM_001099 ABOM_000318 ABOM_000318 ABOM_000248 ABOM_000248 ABOM_000226 ABOM_000226
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABOM_000479Uncharacterized protein. (305 aa)
ABOM_012244WD domain protein. (931 aa)
ABOM_011888Uncharacterized protein. (559 aa)
ABOM_011499rRNA methyltransferase NOP1. (317 aa)
ABOM_012028Uncharacterized protein. (222 aa)
ABOM_012017Exportin KapK. (1072 aa)
ABOM_011307Nucleolar protein nop5. (578 aa)
ABOM_01082760S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (520 aa)
ABOM_010796AAA family ATPase. (753 aa)
ABOM_011421Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (560 aa)
ABOM_010658Small nucleolar ribonucleoprotein complex subunit Utp15. (541 aa)
ABOM_010016Putative ribonuclease P complex subunit Pop2. (311 aa)
ABOM_010015Casein kinase; Belongs to the protein kinase superfamily. (332 aa)
ABOM_010291RNA exonuclease Rex2. (191 aa)
ABOM_010188Putative small nucleolar ribonucleoprotein complex component (Utp5). (847 aa)
ABOM_010223Putative exonuclease. (508 aa)
ABOM_010138Nucleolar GTP-binding protein 1. (658 aa)
ABOM_009787SnoRNA binding protein. (1015 aa)
ABOM_009871Uncharacterized protein. (508 aa)
ABOM_010187Transcription regulator BDF1. (797 aa)
ABOM_008911Pseudouridine synthase. (413 aa)
ABOM_009738Spindle pole body component. (797 aa)
ABOM_008745Uncharacterized protein. (128 aa)
ABOM_008766Protein rai1. (368 aa)
ABOM_009671Ribosome biogenesis (Nop4). (728 aa)
ABOM_009677Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (355 aa)
ABOM_008616Ribonuclease P protein subunit. (245 aa)
ABOM_009704U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (697 aa)
ABOM_008271Centromere/microtubule-binding protein cbf5. (692 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (247 aa)
ABOM_008260Adenylate kinase fap7. (145 aa)
ABOM_008310Uncharacterized protein. (157 aa)
ABOM_008167UPF0023 family protein. (343 aa)
ABOM_007940Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (349 aa)
ABOM_008471mRNA export factor mex67. (704 aa)
ABOM_008887Casein kinase I hhp1; Belongs to the protein kinase superfamily. (403 aa)
ABOM_008115RRP7 superfamily domain-containing protein. (310 aa)
ABOM_007643RNA exonuclease 3. (656 aa)
ABOM_007835Serine/threonine-protein kinase rio2. (403 aa)
ABOM_008522Putative small nucleolar ribonucleoprotein complex subunit. (952 aa)
ABOM_006909Uncharacterized protein. (136 aa)
ABOM_006888AAA family ATPase/60S ribosome export protein Rix7. (741 aa)
ABOM_007132RNase3 domain protein. (359 aa)
ABOM_00717620S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (443 aa)
ABOM_007175Putative ribosome biogenesis protein nop10. (67 aa)
ABOM_007328Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (302 aa)
ABOM_007735RNA exonuclease. (350 aa)
ABOM_006957Ribosome biogenesis GTPase Lsg1. (658 aa)
ABOM_006770Uncharacterized protein. (625 aa)
ABOM_006590Ribosome biogenesis protein Kri1. (606 aa)
ABOM_006604Uncharacterized protein. (385 aa)
ABOM_007373Rieske domain protein. (458 aa)
ABOM_007450Uncharacterized protein. (213 aa)
ABOM_006181Periodic tryptophan protein 2. (900 aa)
ABOM_0061785'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1409 aa)
ABOM_006101Ribosome biogenesis protein BMS1. (1171 aa)
ABOM_007085Putative U3 small nucleolar ribonucleoprotein subunit (Imp3). (188 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1069 aa)
ABOM_005365Small nucleolar ribonucleoprotein complex subunit Dip2. (956 aa)
ABOM_006355Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4877 aa)
ABOM_005537rRNA processing protein Utp6. (395 aa)
ABOM_005519Uncharacterized protein. (285 aa)
ABOM_005170U3 small nucleolar RNA-associated protein 22. (1110 aa)
ABOM_005218RNA processing protein Emg1. (262 aa)
ABOM_005520Nucleolar protein 56. (522 aa)
ABOM_005342Small nucleolar ribonucleoprotein complex subunit. (611 aa)
ABOM_005675Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (566 aa)
ABOM_005344Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
ABOM_004569Zn(II)2Cys6 transcription factor. (736 aa)
ABOM_003730Putative small nucleolar ribonucleoprotein complex subunit. (980 aa)
ABOM_003700Nuclear transport factor 2 domain protein. (162 aa)
ABOM_005024Uncharacterized protein. (414 aa)
ABOM_002569Uncharacterized protein. (279 aa)
ABOM_002652Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (369 aa)
ABOM_004214GTP-binding protein. (545 aa)
ABOM_004273Putative exonuclease. (737 aa)
ABOM_004184Uncharacterized protein. (1673 aa)
ABOM_002096Putative gibberellin 20-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (296 aa)
ABOM_003471Ribonuclease P complex subunit Pop1. (882 aa)
ABOM_003426Uncharacterized protein. (277 aa)
ABOM_002395U3 small nucleolar ribonucleoprotein IMP4. (299 aa)
ABOM_002454Ribosome biogenesis protein Nhp2. (232 aa)
ABOM_003049rRNA-processing protein fcf1. (191 aa)
ABOM_002983Ribosome assembly protein 1. (1082 aa)
ABOM_002982DUF4604 domain-containing protein. (165 aa)
ABOM_002269Putative small nucleolar ribonucleoprotein complex subunit Utp14. (967 aa)
ABOM_001376U3 small nucleolar RNA-associated protein 10. (1802 aa)
ABOM_001119Uncharacterized protein. (163 aa)
ABOM_000893C2H2 finger domain protein. (443 aa)
ABOM_001370GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (491 aa)
ABOM_001120DUF167 domain protein. (131 aa)
ABOM_001165GAR domain-containing protein. (1321 aa)
ABOM_001099RNAse III. (136 aa)
ABOM_000318RNA-3'-phosphate cyclase family protein. (402 aa)
ABOM_000248Uncharacterized protein. (187 aa)
ABOM_000226Rpp14 family. (240 aa)
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
Server load: low (26%) [HD]