10 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109529633	Trafficking protein, kinesin binding 1a. (706 aa)
	LOC109512630	Si:ch211-156l18.8. (1803 aa)
	LOC109527036	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (609 aa)
	ENSHCOP00000023799	Trafficking protein, kinesin binding 2. (606 aa)
	LOC109527449	Si:dkey-28e7.3. (790 aa)
	rhot2	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (618 aa)
	LOC109511185	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (581 aa)
	Cfap70	Uncharacterized protein. (331 aa)
	Myo19	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (190 aa)
	LOC109519204	Uncharacterized protein. (547 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cfap70	ENSHCOP00000023799	ENSHCOP00000027125	ENSHCOP00000023799	Uncharacterized protein.	Trafficking protein, kinesin binding 2.	0.665
Cfap70	LOC109519204	ENSHCOP00000027125	ENSHCOP00000028069	Uncharacterized protein.	Uncharacterized protein.	0.589
Cfap70	LOC109527449	ENSHCOP00000027125	ENSHCOP00000025395	Uncharacterized protein.	Si:dkey-28e7.3.	0.589
Cfap70	LOC109529633	ENSHCOP00000027125	ENSHCOP00000007521	Uncharacterized protein.	Trafficking protein, kinesin binding 1a.	0.589
Cfap70	Myo19	ENSHCOP00000027125	ENSHCOP00000027880	Uncharacterized protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.614
ENSHCOP00000023799	Cfap70	ENSHCOP00000023799	ENSHCOP00000027125	Trafficking protein, kinesin binding 2.	Uncharacterized protein.	0.665
ENSHCOP00000023799	LOC109511185	ENSHCOP00000023799	ENSHCOP00000026493	Trafficking protein, kinesin binding 2.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.665
ENSHCOP00000023799	LOC109519204	ENSHCOP00000023799	ENSHCOP00000028069	Trafficking protein, kinesin binding 2.	Uncharacterized protein.	0.515
ENSHCOP00000023799	LOC109527036	ENSHCOP00000023799	ENSHCOP00000020215	Trafficking protein, kinesin binding 2.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.665
ENSHCOP00000023799	LOC109527449	ENSHCOP00000023799	ENSHCOP00000025395	Trafficking protein, kinesin binding 2.	Si:dkey-28e7.3.	0.514
ENSHCOP00000023799	LOC109529633	ENSHCOP00000023799	ENSHCOP00000007521	Trafficking protein, kinesin binding 2.	Trafficking protein, kinesin binding 1a.	0.501
ENSHCOP00000023799	Myo19	ENSHCOP00000023799	ENSHCOP00000027880	Trafficking protein, kinesin binding 2.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.568
ENSHCOP00000023799	rhot2	ENSHCOP00000023799	ENSHCOP00000025456	Trafficking protein, kinesin binding 2.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.806
LOC109511185	ENSHCOP00000023799	ENSHCOP00000026493	ENSHCOP00000023799	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Trafficking protein, kinesin binding 2.	0.665
LOC109511185	LOC109519204	ENSHCOP00000026493	ENSHCOP00000028069	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Uncharacterized protein.	0.608
LOC109511185	LOC109527036	ENSHCOP00000026493	ENSHCOP00000020215	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.901
LOC109511185	LOC109527449	ENSHCOP00000026493	ENSHCOP00000025395	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Si:dkey-28e7.3.	0.589
LOC109511185	LOC109529633	ENSHCOP00000026493	ENSHCOP00000007521	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Trafficking protein, kinesin binding 1a.	0.608
LOC109511185	Myo19	ENSHCOP00000026493	ENSHCOP00000027880	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.614
LOC109511185	rhot2	ENSHCOP00000026493	ENSHCOP00000025456	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.901