(14 nodes) Mixed, incl. CCAAT-binding factor complex, and Zinc finger binding to DNA consensus sequence [AT]GATA[AG] network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSHCOP00000000611	Mesoderm posterior ba. (146 aa)
	nfya	Nuclear transcription factor Y, alpha, like. (348 aa)
	GATA2	GATA binding protein 2. (434 aa)
	nfyb	Nuclear transcription factor Y, beta a. (203 aa)
	gata4	GATA binding protein 4. (409 aa)
	nfyc	Nuclear transcription factor Y, gamma. (353 aa)
	LOC109521258	GATA binding protein 6. (363 aa)
	ENSHCOP00000016037	LIM zinc-binding domain-containing protein. (122 aa)
	hand2	Heart and neural crest derivatives expressed 2. (203 aa)
	LOC109507298	Im:7138239. (320 aa)
	LOC109511772	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (881 aa)
	zfpm2	Zinc finger protein, FOG family member 2a. (1096 aa)
	trps1	Trichorhinophalangeal syndrome I. (1178 aa)
	LOC109514687	T-box transcription factor 5a. (526 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000016037	LOC109521258	ENSHCOP00000016037	ENSHCOP00000014112	LIM zinc-binding domain-containing protein.	GATA binding protein 6.	0.600
ENSHCOP00000016037	gata4	ENSHCOP00000016037	ENSHCOP00000008932	LIM zinc-binding domain-containing protein.	GATA binding protein 4.	0.541
GATA2	LOC109507298	ENSHCOP00000002963	ENSHCOP00000018019	GATA binding protein 2.	Im:7138239.	0.421
GATA2	hand2	ENSHCOP00000002963	ENSHCOP00000017728	GATA binding protein 2.	Heart and neural crest derivatives expressed 2.	0.415
GATA2	nfya	ENSHCOP00000002963	ENSHCOP00000002577	GATA binding protein 2.	Nuclear transcription factor Y, alpha, like.	0.473
GATA2	nfyb	ENSHCOP00000002963	ENSHCOP00000008162	GATA binding protein 2.	Nuclear transcription factor Y, beta a.	0.666
GATA2	nfyc	ENSHCOP00000002963	ENSHCOP00000010567	GATA binding protein 2.	Nuclear transcription factor Y, gamma.	0.640
GATA2	trps1	ENSHCOP00000002963	ENSHCOP00000025483	GATA binding protein 2.	Trichorhinophalangeal syndrome I.	0.411
GATA2	zfpm2	ENSHCOP00000002963	ENSHCOP00000024704	GATA binding protein 2.	Zinc finger protein, FOG family member 2a.	0.538
LOC109507298	GATA2	ENSHCOP00000018019	ENSHCOP00000002963	Im:7138239.	GATA binding protein 2.	0.421
LOC109507298	LOC109521258	ENSHCOP00000018019	ENSHCOP00000014112	Im:7138239.	GATA binding protein 6.	0.421
LOC109507298	gata4	ENSHCOP00000018019	ENSHCOP00000008932	Im:7138239.	GATA binding protein 4.	0.421
LOC109507298	nfya	ENSHCOP00000018019	ENSHCOP00000002577	Im:7138239.	Nuclear transcription factor Y, alpha, like.	0.948
LOC109507298	nfyb	ENSHCOP00000018019	ENSHCOP00000008162	Im:7138239.	Nuclear transcription factor Y, beta a.	0.949
LOC109507298	trps1	ENSHCOP00000018019	ENSHCOP00000025483	Im:7138239.	Trichorhinophalangeal syndrome I.	0.421
LOC109511772	trps1	ENSHCOP00000019817	ENSHCOP00000025483	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	Trichorhinophalangeal syndrome I.	0.497
LOC109514687	LOC109521258	ENSHCOP00000027462	ENSHCOP00000014112	T-box transcription factor 5a.	GATA binding protein 6.	0.496
LOC109514687	gata4	ENSHCOP00000027462	ENSHCOP00000008932	T-box transcription factor 5a.	GATA binding protein 4.	0.706
LOC109514687	hand2	ENSHCOP00000027462	ENSHCOP00000017728	T-box transcription factor 5a.	Heart and neural crest derivatives expressed 2.	0.652
LOC109521258	ENSHCOP00000016037	ENSHCOP00000014112	ENSHCOP00000016037	GATA binding protein 6.	LIM zinc-binding domain-containing protein.	0.600