(5 nodes) CCAAT-binding factor complex, and Transcription factor, GATA-2/3 network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nfya	Nuclear transcription factor Y, alpha, like. (348 aa)
	GATA2	GATA binding protein 2. (434 aa)
	nfyb	Nuclear transcription factor Y, beta a. (203 aa)
	nfyc	Nuclear transcription factor Y, gamma. (353 aa)
	LOC109507298	Im:7138239. (320 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GATA2	LOC109507298	ENSHCOP00000002963	ENSHCOP00000018019	GATA binding protein 2.	Im:7138239.	0.421
GATA2	nfya	ENSHCOP00000002963	ENSHCOP00000002577	GATA binding protein 2.	Nuclear transcription factor Y, alpha, like.	0.473
GATA2	nfyb	ENSHCOP00000002963	ENSHCOP00000008162	GATA binding protein 2.	Nuclear transcription factor Y, beta a.	0.666
GATA2	nfyc	ENSHCOP00000002963	ENSHCOP00000010567	GATA binding protein 2.	Nuclear transcription factor Y, gamma.	0.640
LOC109507298	GATA2	ENSHCOP00000018019	ENSHCOP00000002963	Im:7138239.	GATA binding protein 2.	0.421
LOC109507298	nfya	ENSHCOP00000018019	ENSHCOP00000002577	Im:7138239.	Nuclear transcription factor Y, alpha, like.	0.948
LOC109507298	nfyb	ENSHCOP00000018019	ENSHCOP00000008162	Im:7138239.	Nuclear transcription factor Y, beta a.	0.949
nfya	GATA2	ENSHCOP00000002577	ENSHCOP00000002963	Nuclear transcription factor Y, alpha, like.	GATA binding protein 2.	0.473
nfya	LOC109507298	ENSHCOP00000002577	ENSHCOP00000018019	Nuclear transcription factor Y, alpha, like.	Im:7138239.	0.948
nfya	nfyb	ENSHCOP00000002577	ENSHCOP00000008162	Nuclear transcription factor Y, alpha, like.	Nuclear transcription factor Y, beta a.	0.999
nfya	nfyc	ENSHCOP00000002577	ENSHCOP00000010567	Nuclear transcription factor Y, alpha, like.	Nuclear transcription factor Y, gamma.	0.998
nfyb	GATA2	ENSHCOP00000008162	ENSHCOP00000002963	Nuclear transcription factor Y, beta a.	GATA binding protein 2.	0.666
nfyb	LOC109507298	ENSHCOP00000008162	ENSHCOP00000018019	Nuclear transcription factor Y, beta a.	Im:7138239.	0.949
nfyb	nfya	ENSHCOP00000008162	ENSHCOP00000002577	Nuclear transcription factor Y, beta a.	Nuclear transcription factor Y, alpha, like.	0.999
nfyb	nfyc	ENSHCOP00000008162	ENSHCOP00000010567	Nuclear transcription factor Y, beta a.	Nuclear transcription factor Y, gamma.	0.998
nfyc	GATA2	ENSHCOP00000010567	ENSHCOP00000002963	Nuclear transcription factor Y, gamma.	GATA binding protein 2.	0.640
nfyc	nfya	ENSHCOP00000010567	ENSHCOP00000002577	Nuclear transcription factor Y, gamma.	Nuclear transcription factor Y, alpha, like.	0.998
nfyc	nfyb	ENSHCOP00000010567	ENSHCOP00000008162	Nuclear transcription factor Y, gamma.	Nuclear transcription factor Y, beta a.	0.998