(5 nodes) Ubiquitin-like domain, and E3 ubiquitin-protein ligase RNF123/RSPRY1-like network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rnf123	Ring finger protein 123. (1227 aa)
	USP15	Ubiquitin carboxyl-terminal hydrolase. (921 aa)
	ubac1	UBA domain containing 1. (440 aa)
	usp19	Ubiquitin specific peptidase 19. (1257 aa)
	LOC109510367	Ubiquitin carboxyl-terminal hydrolase. (987 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109510367	rnf123	ENSHCOP00000023257	ENSHCOP00000011502	Ubiquitin carboxyl-terminal hydrolase.	Ring finger protein 123.	0.773
USP15	rnf123	ENSHCOP00000014014	ENSHCOP00000011502	Ubiquitin carboxyl-terminal hydrolase.	Ring finger protein 123.	0.544
USP15	usp19	ENSHCOP00000014014	ENSHCOP00000021030	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin specific peptidase 19.	0.518
rnf123	LOC109510367	ENSHCOP00000011502	ENSHCOP00000023257	Ring finger protein 123.	Ubiquitin carboxyl-terminal hydrolase.	0.773
rnf123	USP15	ENSHCOP00000011502	ENSHCOP00000014014	Ring finger protein 123.	Ubiquitin carboxyl-terminal hydrolase.	0.544
rnf123	ubac1	ENSHCOP00000011502	ENSHCOP00000016394	Ring finger protein 123.	UBA domain containing 1.	0.945
rnf123	usp19	ENSHCOP00000011502	ENSHCOP00000021030	Ring finger protein 123.	Ubiquitin specific peptidase 19.	0.773
ubac1	rnf123	ENSHCOP00000016394	ENSHCOP00000011502	UBA domain containing 1.	Ring finger protein 123.	0.945
usp19	USP15	ENSHCOP00000021030	ENSHCOP00000014014	Ubiquitin specific peptidase 19.	Ubiquitin carboxyl-terminal hydrolase.	0.518
usp19	rnf123	ENSHCOP00000021030	ENSHCOP00000011502	Ubiquitin specific peptidase 19.	Ring finger protein 123.	0.773