48 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109511462	Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (471 aa)
	LOC109521925	Vascular endothelial growth factor Aa; Belongs to the PDGF/VEGF growth factor family. (179 aa)
	sp1	Sp1 transcription factor. (523 aa)
	sirt6	Sirtuin 6. (347 aa)
	fgf7	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (202 aa)
	ENSHCOP00000001163	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (337 aa)
	LOC109514626	Extracellular matrix protein 1a. (139 aa)
	ENSHCOP00000002650	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (187 aa)
	prok1	Prokineticin 1. (107 aa)
	LOC109523155	Sirtuin 1. (657 aa)
	LOC109526430	Bone morphogenetic protein 16. (439 aa)
	mydgf	Myeloid-derived growth factor. (170 aa)
	ENSHCOP00000007590	Fibroblast growth factor binding protein 1b. (204 aa)
	ENSHCOP00000008218	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family. (359 aa)
	ENSHCOP00000008341	LRRCT domain-containing protein. (319 aa)
	LOC109516804	LRRCT domain-containing protein. (351 aa)
	LOC109521474	Prokineticin 2. (107 aa)
	htr2b	5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled. (470 aa)
	aggf1	Angiogenic factor with G patch and FHA domains 1. (738 aa)
	agtr1	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family. (365 aa)
	vegfa	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (174 aa)
	nf1	Neurofibromin 1b. (2754 aa)
	bmpr2	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (492 aa)
	LOC109511660	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family. (376 aa)
	ywhaq	ADAM metallopeptidase domain 17a. (883 aa)
	LOC109528097	JunE proto-oncogene, AP-1 transcription factor subunit. (344 aa)
	LOC109532403	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (290 aa)
	LOC109506885	Secretogranin II (chromogranin C), b. (590 aa)
	bmp4	Bone morphogenetic protein 4. (350 aa)
	vegfc	Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (393 aa)
	vip	Vasoactive intestinal peptide. (152 aa)
	ENSHCOP00000019285	Deacetylase sirtuin-type domain-containing protein. (166 aa)
	ENSHCOP00000019306	Sirtuin 1. (369 aa)
	ENSHCOP00000020324	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (344 aa)
	ENSHCOP00000020337	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (367 aa)
	ENSHCOP00000020347	Apelin receptor early endogenous ligand. (62 aa)
	ENSHCOP00000020575	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (216 aa)
	LOC109531720	ADAM metallopeptidase domain 17b. (805 aa)
	LOC109529028	Uncharacterized protein. (499 aa)
	il10	Uncharacterized protein. (236 aa)
	igf2	Insulin-like growth factor 2b. (216 aa)
	LOC109509080	TGF_BETA_2 domain-containing protein. (247 aa)
	LOC109524148	Uncharacterized protein. (284 aa)
	LOC109524113	Uncharacterized protein. (1303 aa)
	rptor	Regulatory associated protein of MTOR, complex 1. (1265 aa)
	scg2	Uncharacterized protein. (598 aa)
	LOC109509807	Fibroblast growth factor binding protein 1b. (204 aa)
	Vegfb	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (119 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000001163	ENSHCOP00000020347	ENSHCOP00000001163	ENSHCOP00000020347	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Apelin receptor early endogenous ligand.	0.710
ENSHCOP00000001163	agtr1	ENSHCOP00000001163	ENSHCOP00000009345	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	0.542
ENSHCOP00000002650	LOC109511462	ENSHCOP00000002650	ENSHCOP00000002473	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family.	0.918
ENSHCOP00000002650	LOC109521925	ENSHCOP00000002650	ENSHCOP00000000067	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor Aa; Belongs to the PDGF/VEGF growth factor family.	0.523
ENSHCOP00000002650	Vegfb	ENSHCOP00000002650	ENSHCOP00000028299	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.954
ENSHCOP00000002650	vegfa	ENSHCOP00000002650	ENSHCOP00000009916	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family.	0.950
ENSHCOP00000002650	vegfc	ENSHCOP00000002650	ENSHCOP00000017677	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.	0.965
ENSHCOP00000007590	fgf7	ENSHCOP00000007590	ENSHCOP00000000905	Fibroblast growth factor binding protein 1b.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.721
ENSHCOP00000008218	ENSHCOP00000020347	ENSHCOP00000008218	ENSHCOP00000020347	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.	Apelin receptor early endogenous ligand.	0.710
ENSHCOP00000008218	agtr1	ENSHCOP00000008218	ENSHCOP00000009345	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	0.542
ENSHCOP00000019285	LOC109528097	ENSHCOP00000019285	ENSHCOP00000013147	Deacetylase sirtuin-type domain-containing protein.	JunE proto-oncogene, AP-1 transcription factor subunit.	0.456
ENSHCOP00000019285	LOC109532403	ENSHCOP00000019285	ENSHCOP00000014545	Deacetylase sirtuin-type domain-containing protein.	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	0.456
ENSHCOP00000019285	sirt6	ENSHCOP00000019285	ENSHCOP00000000544	Deacetylase sirtuin-type domain-containing protein.	Sirtuin 6.	0.430
ENSHCOP00000019306	LOC109528097	ENSHCOP00000019306	ENSHCOP00000013147	Sirtuin 1.	JunE proto-oncogene, AP-1 transcription factor subunit.	0.456
ENSHCOP00000019306	LOC109532403	ENSHCOP00000019306	ENSHCOP00000014545	Sirtuin 1.	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	0.456
ENSHCOP00000019306	sirt6	ENSHCOP00000019306	ENSHCOP00000000544	Sirtuin 1.	Sirtuin 6.	0.430
ENSHCOP00000020324	ENSHCOP00000020347	ENSHCOP00000020324	ENSHCOP00000020347	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Apelin receptor early endogenous ligand.	0.710
ENSHCOP00000020324	agtr1	ENSHCOP00000020324	ENSHCOP00000009345	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	0.542
ENSHCOP00000020337	ENSHCOP00000020347	ENSHCOP00000020337	ENSHCOP00000020347	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Apelin receptor early endogenous ligand.	0.710
ENSHCOP00000020337	agtr1	ENSHCOP00000020337	ENSHCOP00000009345	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	0.542