STRINGSTRING
LOC109525107 LOC109525107 top2a top2a phb phb LOC109517234 LOC109517234 ercc1 ercc1 xrcc4 xrcc4 LOC109529380 LOC109529380 LOC109522581 LOC109522581 shank2 shank2 LOC109517296 LOC109517296 msh2 msh2 CIITA CIITA ercc2 ercc2 ENSHCOP00000012322 ENSHCOP00000012322 efhc1 efhc1 ENSHCOP00000011990 ENSHCOP00000011990 numa1 numa1 yeats4 yeats4 ENSHCOP00000011601 ENSHCOP00000011601 pex10 pex10 neil1 neil1 ENSHCOP00000010827 ENSHCOP00000010827 ift52 ift52 LOC109510825 LOC109510825 arl6ip5 arl6ip5 vgll2 vgll2 sp1 sp1 LOC109507390 LOC109507390 ENSHCOP00000000251 ENSHCOP00000000251 paxip1 paxip1 LOC109527160 LOC109527160 tax1bp3 tax1bp3 tnfaip3 tnfaip3 LOC109517916 LOC109517916 LOC109514626 LOC109514626 dab2 dab2 sash1 sash1 Patj Patj ENSHCOP00000002402 ENSHCOP00000002402 VPS4B VPS4B LOC109519660 LOC109519660 snf8 snf8 pdzd11 pdzd11 LOC109523155 LOC109523155 LOC109530558 LOC109530558 grip1 grip1 ENSHCOP00000003686 ENSHCOP00000003686 mad2l1 mad2l1 crocc crocc pick1 pick1 ENSHCOP00000006497 ENSHCOP00000006497 LOC109527739 LOC109527739 ift46 ift46 LOC109509139 LOC109509139 vta1 vta1 ENSHCOP00000007220 ENSHCOP00000007220 ENSHCOP00000007380 ENSHCOP00000007380 xrcc6 xrcc6 LOC109512841 LOC109512841 LOC109515691 LOC109515691 pex12 pex12 LOC109508115 LOC109508115 ENSHCOP00000009220 ENSHCOP00000009220 ENSHCOP00000028388 ENSHCOP00000028388 ercc6 ercc6 LOC109528550 LOC109528550 LOC109522067 LOC109522067 xrcc5 xrcc5 pex26 pex26 sae1 sae1 Top2b Top2b ercc4 ercc4 LOC109518016 LOC109518016 cnrip1 cnrip1 LOC109514850 LOC109514850 pxk pxk rad51 rad51 cep120 cep120 mdc1 mdc1 LOC109531179 LOC109531179 lig4 lig4 polr2a polr2a ENSHCOP00000023012 ENSHCOP00000023012 pex6 pex6 LOC109521585 LOC109521585 LOC109527622 LOC109527622 vgll3 vgll3 LOC109531692 LOC109531692 ENSHCOP00000021302 ENSHCOP00000021302 hspg2 hspg2 taf13 taf13 LOC109513925 LOC109513925 LOC109529028 LOC109529028 LOC109532564 LOC109532564 ENSHCOP00000020261 ENSHCOP00000020261 ENSHCOP00000020216 ENSHCOP00000020216 ENSHCOP00000020196 ENSHCOP00000020196 pex16 pex16 prdx3 prdx3 atxn2 atxn2 ENSHCOP00000019306 ENSHCOP00000019306 ENSHCOP00000019285 ENSHCOP00000019285 LOC109519737 LOC109519737 id1 id1 usp7 usp7 ENSHCOP00000017315 ENSHCOP00000017315 Lmo7 Lmo7 ENSHCOP00000016630 ENSHCOP00000016630 ENSHCOP00000016092 ENSHCOP00000016092 ENSHCOP00000015947 ENSHCOP00000015947 LOC109508147 LOC109508147 cited1 cited1 map2k7 map2k7 LOC109528012 LOC109528012 Pex1 Pex1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC109525107X-ray repair complementing defective repair in Chinese hamster cells 4. (386 aa)
top2aDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1555 aa)
phbProhibitin. (271 aa)
LOC109517234Uncharacterized protein. (775 aa)
ercc1Excision repair cross-complementation group 1. (338 aa)
xrcc4Uncharacterized protein. (263 aa)
LOC109529380Melanoma cell adhesion molecule b. (733 aa)
LOC109522581Marker of proliferation Ki-67. (2064 aa)
shank2SH3 and multiple ankyrin repeat domains 2a. (1748 aa)
LOC109517296Synaptojanin 2 binding protein. (145 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (946 aa)
CIITAClass II major histocompatibility complex transactivator. (1134 aa)
ercc2Excision repair cross-complementation group 2. (591 aa)
ENSHCOP00000012322HATPase_c domain-containing protein. (202 aa)
efhc1EF-hand domain (C-terminal) containing 1. (589 aa)
ENSHCOP00000011990Si:dkey-92j12.5. (1477 aa)
numa1Uncharacterized protein. (1815 aa)
yeats4YEATS domain containing 4. (226 aa)
ENSHCOP00000011601Sodium channel and clathrin linker 1. (497 aa)
pex10Peroxisomal biogenesis factor 10. (328 aa)
neil1Nei-like DNA glycosylase 1. (362 aa)
ENSHCOP00000010827CENP-F_N domain-containing protein. (70 aa)
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (435 aa)
LOC109510825Uncharacterized protein. (393 aa)
arl6ip5PRA1 family protein. (191 aa)
vgll2Vestigial-like family member 2a. (295 aa)
sp1Sp1 transcription factor. (523 aa)
LOC109507390Uncharacterized protein. (629 aa)
ENSHCOP00000000251TPR_REGION domain-containing protein. (183 aa)
paxip1PAX interacting (with transcription-activation domain) protein 1. (1143 aa)
LOC109527160WH1 domain-containing protein. (353 aa)
tax1bp3Tax1 (human T-cell leukemia virus type I) binding protein 3. (131 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (753 aa)
LOC109517916Uncharacterized protein. (622 aa)
LOC109514626Extracellular matrix protein 1a. (139 aa)
dab2DAB adaptor protein 2. (741 aa)
sash1SAM and SH3 domain containing 1a. (1177 aa)
PatjPDZ domain-containing protein. (225 aa)
ENSHCOP00000002402MIT domain-containing protein. (106 aa)
VPS4BVacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (437 aa)
LOC109519660Calponin-homology (CH) domain-containing protein. (155 aa)
snf8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
pdzd11PDZ domain containing 11. (142 aa)
LOC109523155Sirtuin 1. (657 aa)
LOC109530558Uncharacterized protein. (686 aa)
grip1Glutamate receptor interacting protein 1. (885 aa)
ENSHCOP00000003686PDZ domain-containing protein. (181 aa)
mad2l1MAD2 mitotic arrest deficient-like 1 (yeast). (202 aa)
croccUncharacterized protein. (1579 aa)
pick1Protein interacting with prkca 1. (413 aa)
ENSHCOP00000006497Vps4_C domain-containing protein. (70 aa)
LOC109527739SH3 and multiple ankyrin repeat domains 1. (811 aa)
ift46Intraflagellar transport 46 homolog (Chlamydomonas). (327 aa)
LOC109509139Uncharacterized protein. (138 aa)
vta1Vesicle (multivesicular body) trafficking 1. (346 aa)
ENSHCOP00000007220Uncharacterized protein. (152 aa)
ENSHCOP00000007380PRA1 family protein. (60 aa)
xrcc6X-ray repair complementing defective repair in Chinese hamster cells 6. (609 aa)
LOC109512841E1A binding protein p300 a. (2561 aa)
LOC109515691PH domain-containing protein. (185 aa)
pex12Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (342 aa)
LOC109508115Cannabinoid receptor interacting protein 1b. (147 aa)
ENSHCOP00000009220NPAT_C domain-containing protein. (1159 aa)
ENSHCOP00000028388Uncharacterized protein. (468 aa)
ercc6Excision repair cross-complementation group 6. (1377 aa)
LOC109528550AXH domain-containing protein. (649 aa)
LOC109522067Fibronectin 1a. (2484 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (729 aa)
pex26Peroxisomal biogenesis factor 26. (307 aa)
sae1SUMO1 activating enzyme subunit 1. (349 aa)
Top2bTOP4c domain-containing protein. (432 aa)
ercc4Excision repair cross-complementation group 4. (900 aa)
LOC109518016Ataxin 1b. (819 aa)
cnrip1Cannabinoid receptor interacting protein 1b. (162 aa)
LOC109514850E1A binding protein p300 b. (2669 aa)
pxkPX domain containing serine/threonine kinase. (558 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (338 aa)
cep120Centrosomal protein 120. (819 aa)
mdc1BRCT domain-containing protein. (1811 aa)
LOC109531179PDZ domain containing 3b. (474 aa)
lig4DNA ligase. (910 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
ENSHCOP00000023012Uncharacterized protein. (1155 aa)
pex6AAA domain-containing protein. (885 aa)
LOC109521585PRA1 family protein. (190 aa)
LOC109527622Cannabinoid receptor interacting protein 1a. (156 aa)
vgll3Vestigial-like family member 3. (349 aa)
LOC109531692Basal cell adhesion molecule (Lutheran blood group). (606 aa)
ENSHCOP00000021302Uncharacterized protein. (668 aa)
hspg2Heparan sulfate proteoglycan 2. (3345 aa)
taf13TATA-box binding protein associated factor 13. (124 aa)
LOC109513925Syndecan binding protein (syntenin) 2. (305 aa)
LOC109529028Uncharacterized protein. (499 aa)
LOC109532564Uncharacterized protein. (289 aa)
ENSHCOP00000020261Uncharacterized protein. (188 aa)
ENSHCOP00000020216Uncharacterized protein. (787 aa)
ENSHCOP00000020196Uncharacterized protein. (248 aa)
pex16Peroxisomal membrane protein PEX16. (344 aa)
prdx3Peroxiredoxin 3. (241 aa)
atxn2Ataxin 2. (1079 aa)
ENSHCOP00000019306Sirtuin 1. (369 aa)
ENSHCOP00000019285Deacetylase sirtuin-type domain-containing protein. (166 aa)
LOC109519737LIM zinc-binding domain-containing protein. (946 aa)
id1Inhibitor of DNA binding 1, HLH protein. (132 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1111 aa)
ENSHCOP00000017315TPR_REGION domain-containing protein. (135 aa)
Lmo7Calponin-homology (CH) domain-containing protein. (191 aa)
ENSHCOP00000016630LIM domain 7a. (1165 aa)
ENSHCOP00000016092Fibulin 5. (547 aa)
ENSHCOP00000015947Checkpoint suppressor 1. (225 aa)
LOC109508147Checkpoint suppressor 1. (398 aa)
cited1Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1. (168 aa)
map2k7Mitogen-activated protein kinase kinase 7. (422 aa)
LOC109528012Ataxin 1a. (709 aa)
Pex1Uncharacterized protein. (379 aa)
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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