69 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSHCOP00000016349	Nuclear protein 1a. (76 aa)
	LOC109507329	Uncharacterized protein. (401 aa)
	sirt6	Sirtuin 6. (347 aa)
	LOC109532193	Midnolin. (426 aa)
	foxk2	Uncharacterized protein. (629 aa)
	nupr1	Nuclear protein 1b. (74 aa)
	IGFBP4	Insulin like growth factor binding protein 4. (261 aa)
	lcmt1	Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family. (325 aa)
	DGKQ	Diacylglycerol kinase. (868 aa)
	mtor	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2512 aa)
	LOC109523155	Sirtuin 1. (657 aa)
	LOC109515220	Protein-serine/threonine kinase. (410 aa)
	mlycd	Malonyl-CoA decarboxylase. (504 aa)
	soga1	Suppressor of glucose, autophagy associated 1. (1663 aa)
	zmpste24	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (471 aa)
	LOC109524696	Insulin-like growth factor binding protein 3. (357 aa)
	LOC109508605	Protein-serine/threonine kinase. (414 aa)
	acadm	Acyl-CoA dehydrogenase medium chain. (425 aa)
	LOC109512841	E1A binding protein p300 a. (2561 aa)
	LOC109511261	Forkhead box K1. (618 aa)
	LOC109526718	Uncharacterized protein. (162 aa)
	FAM3A	Family with sequence similarity 3 member A. (230 aa)
	fam3c	Family with sequence similarity 3 member C. (232 aa)
	LOC109511882	Protein-serine/threonine kinase. (406 aa)
	ENSHCOP00000010229	Protein phosphatase 1, regulatory subunit 3Db. (259 aa)
	tigar	TP53 induced glycolysis regulatory phosphatase a. (263 aa)
	ENSHCOP00000010429	Protein phosphatase 1, regulatory subunit 3B. (212 aa)
	ENSHCOP00000010512	Uncharacterized protein. (148 aa)
	bad	Uncharacterized protein. (173 aa)
	LOC109521513	BHLH domain-containing protein. (327 aa)
	khk	Ketohexokinase. (356 aa)
	sirt7	Sirtuin 7. (364 aa)
	ENSHCOP00000012417	CBM21 domain-containing protein. (295 aa)
	ENSHCOP00000013250	Uncharacterized protein. (113 aa)
	ENSHCOP00000014775	Insulin-like growth factor 1. (181 aa)
	ddb1	Damage-specific DNA binding protein 1. (1093 aa)
	ppp1r3c	Protein phosphatase 1 regulatory subunit. (319 aa)
	LOC109523313	RAN binding protein 2. (2954 aa)
	LOC109525257	Scavenger receptor class B, member 2a; Belongs to the CD36 family. (530 aa)
	IGFBP3	Insulin like growth factor binding protein 3. (290 aa)
	flcn	Folliculin. (550 aa)
	LOC109513345	C1q and TNF related 1. (266 aa)
	gins4	Zgc:77112. (288 aa)
	bckdk	Protein-serine/threonine kinase. (455 aa)
	usp7	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1111 aa)
	ENSHCOP00000018192	Si:dkey-6n21.13; Belongs to the G-protein coupled receptor 1 family. (331 aa)
	ogt	O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1. (1050 aa)
	LOC109517058	Scavenger receptor class B, member 2c; Belongs to the CD36 family. (479 aa)
	ENSHCOP00000019285	Deacetylase sirtuin-type domain-containing protein. (166 aa)
	ENSHCOP00000019306	Sirtuin 1. (369 aa)
	ppp1r3g	Si:ch211-152c8.5. (251 aa)
	LOC109519035	Leptin receptor. (1118 aa)
	LOC109527735	Uncharacterized protein. (596 aa)
	LOC109520286	C1q and TNF related 6a. (247 aa)
	igf2	Insulin-like growth factor 2b. (216 aa)
	ENSHCOP00000022522	CBM21 domain-containing protein. (253 aa)
	pdk1	Protein-serine/threonine kinase. (407 aa)
	PPP1R3B	Protein phosphatase 1 regulatory subunit. (235 aa)
	LOC109530324	CBM21 domain-containing protein. (347 aa)
	gckr	SIS domain-containing protein. (558 aa)
	LOC109514850	E1A binding protein p300 b. (2669 aa)
	gnmt	Glycine N-methyltransferase. (296 aa)
	P2RY6	Pyrimidinergic receptor P2Y6; Belongs to the G-protein coupled receptor 1 family. (358 aa)
	dusp12	Dual specificity phosphatase 12. (299 aa)
	LOC109530168	Protein-serine/threonine kinase. (408 aa)
	pask	PAS domain containing serine/threonine kinase. (1042 aa)
	LOC109518612	Cytochrome c oxidase assembly homolog 11 (yeast). (322 aa)
	LOC109526639	Protein phosphatase 1, regulatory subunit 3Da. (273 aa)
	ENSHCOP00000027903	annotation not available (76 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000013250	ENSHCOP00000014775	ENSHCOP00000013250	ENSHCOP00000014775	Uncharacterized protein.	Insulin-like growth factor 1.	0.591
ENSHCOP00000014775	ENSHCOP00000013250	ENSHCOP00000014775	ENSHCOP00000013250	Insulin-like growth factor 1.	Uncharacterized protein.	0.591
ENSHCOP00000014775	IGFBP3	ENSHCOP00000014775	ENSHCOP00000016803	Insulin-like growth factor 1.	Insulin like growth factor binding protein 3.	0.928
ENSHCOP00000014775	IGFBP4	ENSHCOP00000014775	ENSHCOP00000001407	Insulin-like growth factor 1.	Insulin like growth factor binding protein 4.	0.886
ENSHCOP00000014775	LOC109524696	ENSHCOP00000014775	ENSHCOP00000006382	Insulin-like growth factor 1.	Insulin-like growth factor binding protein 3.	0.928
ENSHCOP00000014775	LOC109526718	ENSHCOP00000014775	ENSHCOP00000008370	Insulin-like growth factor 1.	Uncharacterized protein.	0.596
ENSHCOP00000014775	igf2	ENSHCOP00000014775	ENSHCOP00000021870	Insulin-like growth factor 1.	Insulin-like growth factor 2b.	0.772
ENSHCOP00000014775	mtor	ENSHCOP00000014775	ENSHCOP00000002338	Insulin-like growth factor 1.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.416
ENSHCOP00000019285	LOC109512841	ENSHCOP00000019285	ENSHCOP00000007909	Deacetylase sirtuin-type domain-containing protein.	E1A binding protein p300 a.	0.442
ENSHCOP00000019285	LOC109514850	ENSHCOP00000019285	ENSHCOP00000024673	Deacetylase sirtuin-type domain-containing protein.	E1A binding protein p300 b.	0.442
ENSHCOP00000019285	mtor	ENSHCOP00000019285	ENSHCOP00000002338	Deacetylase sirtuin-type domain-containing protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.508
ENSHCOP00000019285	sirt6	ENSHCOP00000019285	ENSHCOP00000000544	Deacetylase sirtuin-type domain-containing protein.	Sirtuin 6.	0.430
ENSHCOP00000019285	sirt7	ENSHCOP00000019285	ENSHCOP00000012046	Deacetylase sirtuin-type domain-containing protein.	Sirtuin 7.	0.460
ENSHCOP00000019306	LOC109512841	ENSHCOP00000019306	ENSHCOP00000007909	Sirtuin 1.	E1A binding protein p300 a.	0.442
ENSHCOP00000019306	LOC109514850	ENSHCOP00000019306	ENSHCOP00000024673	Sirtuin 1.	E1A binding protein p300 b.	0.442
ENSHCOP00000019306	mtor	ENSHCOP00000019306	ENSHCOP00000002338	Sirtuin 1.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.508
ENSHCOP00000019306	sirt6	ENSHCOP00000019306	ENSHCOP00000000544	Sirtuin 1.	Sirtuin 6.	0.430
ENSHCOP00000019306	sirt7	ENSHCOP00000019306	ENSHCOP00000012046	Sirtuin 1.	Sirtuin 7.	0.460
IGFBP3	ENSHCOP00000014775	ENSHCOP00000016803	ENSHCOP00000014775	Insulin like growth factor binding protein 3.	Insulin-like growth factor 1.	0.928
IGFBP3	LOC109524696	ENSHCOP00000016803	ENSHCOP00000006382	Insulin like growth factor binding protein 3.	Insulin-like growth factor binding protein 3.	0.902