(10 nodes) Regulation of protein kinase A signaling network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAMP3	Receptor activity modifying protein 3. (101 aa)
	akap12	A kinase (PRKA) anchor protein 12b. (1313 aa)
	tcim	Transcriptional and immune response regulator a. (100 aa)
	akap7	Uncharacterized protein. (439 aa)
	Mc1r	Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. (322 aa)
	ENSHCOP00000013336	Protein kinase domain-containing protein. (472 aa)
	ENSHCOP00000028327	A kinase (PRKA) anchor protein 6. (1620 aa)
	Adgrv1	Uncharacterized protein. (866 aa)
	ENSHCOP00000013347	Uncharacterized protein. (1158 aa)
	ENSHCOP00000015517	G_PROTEIN_RECEP_F2_4 domain-containing protein. (315 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Adgrv1	ENSHCOP00000015517	ENSHCOP00000015489	ENSHCOP00000015517	Uncharacterized protein.	G_PROTEIN_RECEP_F2_4 domain-containing protein.	0.900
ENSHCOP00000013336	ENSHCOP00000013347	ENSHCOP00000013336	ENSHCOP00000013347	Protein kinase domain-containing protein.	Uncharacterized protein.	0.945
ENSHCOP00000013347	ENSHCOP00000013336	ENSHCOP00000013347	ENSHCOP00000013336	Uncharacterized protein.	Protein kinase domain-containing protein.	0.945
ENSHCOP00000015517	Adgrv1	ENSHCOP00000015517	ENSHCOP00000015489	G_PROTEIN_RECEP_F2_4 domain-containing protein.	Uncharacterized protein.	0.900
ENSHCOP00000028327	akap7	ENSHCOP00000028327	ENSHCOP00000023691	A kinase (PRKA) anchor protein 6.	Uncharacterized protein.	0.617
akap7	ENSHCOP00000028327	ENSHCOP00000023691	ENSHCOP00000028327	Uncharacterized protein.	A kinase (PRKA) anchor protein 6.	0.617